Return to main results Retrieve Phyre Job Id

Job DescriptionO89032
Confidence99.68%DateWed Jul 10 14:33:53 BST 2013
Rank116Aligned Residues68
% Identity15%Templatec1x6bA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:rho guanine exchange factor (gef) 16; PDBTitle: solution structures of the sh3 domain of human rho guanine2 exchange factor (gef) 16
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1051........1060.........1070...... ...1080.........1090.........1100.........
Predicted Secondary structure 




















.




















Query SS confidence 

























.
































Query Sequence  PKPIEKSQFIHNNLKDVYISIADYEG. DEETAGFQEGVSMEVLEKNPNGWWYCQILDEVK
Query Conservation                     




 
.  




  

 
 

 
 
 


 


 
   
Alig confidence 

























.



















.










.
Template Conservation 

               
 
   
 
   



   

 
 
     . 

       
.
Template Sequence  SGSSGWQGLSSKGDLPQVEITKAFFAKQADEVTLQQADVVLVLQQED. GWLYGERLRDG.
Template Known Secondary structure 



S






SS

SS




SSSB



TTT.TTTT
.
Template Predicted Secondary structure 

































.





.
Template SS confidence 



























































   3......10.........20.........30.........40......... 50.........60
 
   1110.........1120.
Predicted Secondary structure 



Query SS confidence 











Query Sequence  PFKGWVPSNYLE
Query Conservation   
 
 





 
Alig confidence  .










Template Conservation  .  
 

 



Template Sequence  . ETGWFPEDFAR
Template Known Secondary structure  .

GGG
Template Predicted Secondary structure  .
Template SS confidence 











   61........70.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D