Return to main results Retrieve Phyre Job Id

Job DescriptionO89032
Confidence99.69%DateWed Jul 10 14:33:53 BST 2013
Rank89Aligned Residues70
% Identity17%Templatec1x43A_
PDB info PDB header:endocytosis/exocytosisChain: A: PDB Molecule:sh3 domain grb2-like protein b1; PDBTitle: solution structure of the sh3 domain of endophilin b12 (sh3g1b1)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1051........1060.........1070...... ...1080.........1090..... ....1100.......
Predicted Secondary structure 




















.












..





Query SS confidence 

























.


















. .











Query Sequence  PKPIEKSQFIHNNLKDVYISIADYEG. DEETAGFQEGVSMEVLEKN. . PNGWWYCQILDE
Query Conservation                     




 
.  




  

 
 

 
 ..
 


 


 
 
Alig confidence 

























.


















..










.
Template Conservation     
               




 
    


   

 
 

        
      
.
Template Sequence  SGSSGLNDLKESSNNRKARVLYDYDAANSTELSLLADEVITVFSVVGMDSDWLMGERGN.
Template Known Secondary structure 














SS



SSTTB



TT


TT

TTTT.
Template Predicted Secondary structure 


































.
Template SS confidence 



























































   3......10.........20.........30.........40.........50.........60.
 
   1108.1110.........1120....
Predicted Secondary structure 







Query SS confidence 
















Query Sequence  VKPFKGWVPSNYLEKKN
Query Conservation     
 
 





    
Alig confidence  ...













Template Conservation  ...  
 

  


 

Template Sequence  . . . QKGKVPITYLELLN
Template Known Secondary structure  ...GGG

Template Predicted Secondary structure  ...

Template SS confidence 
















   62.......70.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D