Job Description O89032 Confidence 93.72% Date Wed Jul 10 14:33:53 BST 2013 Rank 281 Aligned Residues 120 % Identity 21% Template c1m9sA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:internalin b; PDBTitle: crystal structure of internalin b (inlb), a listeria2 monocytogenes virulence protein containing sh3-like3 domains. Resolution 2.65 Å

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		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.				.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																						.	.	.															.
Query SS confidence																						.	.	.															.
Query Sequence		K	Q	E	N	S	E	L	S	L	Q	A	G	E	V	V	D	V	I	E	K	.	.	.	N	E	S	G	W	W	F	V	S	T	S	E	E	Q	.	G	W	V	P	A	T	Y	L	E	A	Q	N	G	T	R	D	D	S	D	I	N	T
Query Conservation																						.	.	.															.
Alig confidence																						.	.	.															.																					.	.
Template Conservation																																																												.	.
Template Sequence		A	K	H	V	N	K	L	S	V	Y	Q	G	K	N	M	R	I	L	R	E	A	K	T	P	I	T	T	W	Y	Q	F	S	I	G	G	K	V	I	G	W	V	D	T	R	A	L	N	T	F	Y	K	Q	S	M	E	K	P	T	.	.
Template Known Secondary structure								G	G	G	G		S	S											S	S									T	T								T	T	T							G	G	G					.	.
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	T	G	E	V	S	K	R	R	K	A	H	L	R	R	L	D	R	R	W	T	L	G	G	M	V	N	R	Q	H	S	R	E	E	K	Y	V	T	V	Q	P	Y	T	S	Q	S	K	D	E	I	G	F	E	K	G	V	T	V	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	T	R	Y	V	S	A	N	K	A	G	E	S	Y	Y	K	V	P	V	A	D	N	P	V	K	R	G	T	L	A	K	Y	K	N	Q	K	L	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	T	T	T	S				S	S	S	S			G	G	G					G	G	G	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																							558	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.
		295	.	.	.				.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure						.	.	.											.
Query SS confidence						.	.	.											.
Query Sequence		V	I	R	K	.	.	.	N	L	E	G	W	W	Y	I	R	Y	.	L	G	K	E	G	W	A	P	A	S	Y	L	K
Query Conservation						.	.	.											.
Alig confidence						.	.	.											.
Template Conservation
Template Sequence		V	D	C	Q	A	T	I	E	G	Q	L	W	Y	R	I	R	T	S	S	T	F	I	G	W	T	K	A	A	N	L	R
Template Known Secondary structure									T	T									S	S	S							G	G	G
Template Predicted Secondary structure
Template SS confidence
		597	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D