Job Description Q60992 Confidence 98.57% Date Wed Jul 10 14:34:39 BST 2013 Rank 291 Aligned Residues 304 % Identity 11% Template c4h8sA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:dcc-interacting protein 13-beta; PDBTitle: crystal structure of human appl2barph domain Resolution 3.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.					.	240	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.
Query SS confidence																																																	.	.	.	.
Query Sequence		D	K	R	S	C	C	L	L	E	I	Q	E	T	E	A	K	Y	Y	R	T	L	E	D	I	E	K	N	Y	M	G	P	L	R	L	V	L	S	P	A	D	M	A	A	V	F	I	N	.	.	.	.	L	E	D	L	I	K	V	H	H
Query Conservation																																																	.	.	.	.
Alig confidence																																																	.	.	.	.
Template Conservation
Template Sequence		N	Q	L	L	Q	A	M	Q	R	V	Y	G	A	Q	N	E	M	C	L	A	T	Q	Q	L	S	K	Q	L	L	A	Y	E	K	Q	N	F	A	D	E	E	V	I	S	T	L	H	Y	F	S	K	V	V	D	E	L	N	L	L	H	T
Template Known Secondary structure																														T	T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																															.																									.	.	.	.	.	.
Query SS confidence																															.																									.	.	.	.	.	.
Query Sequence		S	F	L	R	A	I	D	V	S	M	M	A	G	G	S	T	L	A	K	V	F	L	E	F	K	E	R	L	L	.	I	Y	G	E	Y	C	S	H	M	E	H	A	Q	S	T	L	N	Q	L	L	A	S	R	E	.	.	.	.	.	.
Query Conservation																															.																									.	.	.	.	.	.
Alig confidence																															.																									.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	A	K	Q	L	A	D	T	M	V	L	P	I	I	Q	F	R	E	K	D	L	T	E	V	S	T	L	K	D	L	F	G	L	A	S	N	E	H	D	L	S	M	A	K	Y	S	R	L	P	K	K	K	E	N	E	K	V	K	T
Template Known Secondary structure											T										T																													S		S	T	T
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.												.
Query SS confidence																																																	.												.
Query Sequence		D	F	R	Q	K	V	E	E	C	T	L	R	V	Q	D	G	K	F	K	L	Q	D	L	L	V	V	P	M	Q	R	V	L	K	Y	H	L	L	L	K	E	L	L	S	H	S	A	D	.	R	P	E	R	Q	Q	L	K	E	A	L	.
Query Conservation																																																	.												.
Alig confidence																																.	.																.												.
Template Conservation																																.	.
Template Sequence		E	V	G	K	E	V	A	A	A	R	R	K	Q	H	L	S	S	L	Q	Y	Y	C	A	L	N	A	L	Q	Y	R	.	.	K	Q	M	A	M	M	E	P	M	I	G	F	A	H	G	Q	I	N	F	F	K	K	G	A	E	M	F	S
Template Known Secondary structure																																.	.																											S
Template Predicted Secondary structure																																.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
						359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.													.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure		.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	E	A	M	Q	D	L	A	M	Y	I	N	E	V	K	R	D	K	E	T	L	K	K	I	S	E	F	Q	C	S	I	.	.	.	.	.	.	.	.	.	.	.	.	E	N	L	Q	V	K	L	E	E	F	G	R	P	K
Query Conservation		.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	R	M	D	S	F	L	S	S	V	A	D	M	V	Q	S	I	Q	V	E	L	E	A	E	A	E	K	M	R	V	S	Q	Q	E	L	L	S	V	D	E	S	V	Y	T	P	D	S	D	V	A	A	P	Q	I	N	R	N	L	I	Q
Template Known Secondary structure																																							S		T	T	T	T		T	T	S		S	S	S						S		S
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		403	.	.	.	.	.	.	410	.	.				.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		I	D	G	E	L	K	V	R	S	I	.	.	.	V	N	H	T	K	Q	D	R	Y	L	F	L	F	D	K	V	V	I	V	C	K	R	K	G	Y	S	Y	E	L	K	E	V	I	E	L	L	F	H	K	M	T	D	D	P	M	H	N
Query Conservation												.	.	.
Alig confidence												.	.	.																											.	.
Template Conservation																																									.	.
Template Sequence		K	A	G	Y	L	N	L	R	N	K	T	G	L	V	T	T	T	W	E	R	L	Y	F	F	T	Q	G	G	N	L	M	C	Q	P	R	G	A	V	A	.	.	G	G	L	I	Q	D	L	D	N	C	S	V	M	A	V	D	C	E	D
Template Known Secondary structure													S	S	S													S	S							T	T		S	S	.	.					B		S	S										T	T
Template Predicted Secondary structure																																									.	.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.			.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	I	K	K	W	S	Y	G	F	Y	L	I	H	L	Q	G	K	Q	G	F	Q	F	F	C	K	T	E	D	M	K	R	K	W	M	E	Q	F	E	M	A	M	S	N	I
Query Conservation
Alig confidence				.	.	.	.	.
Template Conservation				.	.	.	.	.
Template Sequence		R	R	.	.	.	.	.	Y	C	F	Q	I	T	T	P	N	G	K	S	G	I	I	L	Q	A	E	S	R	K	E	N	E	E	W	I	C	A	I	N	N	I	S	R	Q	I
Template Known Secondary structure			S	.	.	.	.	.	S							T	T	S	S								S	S	S															S
Template Predicted Secondary structure				.	.	.	.	.
Template SS confidence
		338	.						340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D