Job Description Q60992 Confidence 100.00% Date Wed Jul 10 14:34:39 BST 2013 Rank 18 Aligned Residues 291 % Identity 19% Template c4h6yA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ferm, rhogef and pleckstrin domain-containing protein 1; PDBTitle: crystal strucure of the dh-ph-ph domain of farp1 Resolution 4.09 Å Model Dimensions (Å) X:70.067 Y:74.071 Z:39.247

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.			.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.
Query SS confidence																																				.	.
Query Sequence		D	K	R	S	C	C	L	L	E	I	Q	E	T	E	A	K	Y	Y	R	T	L	E	D	I	E	K	N	Y	M	G	P	L	R	L	.	.	V	L	S	P	A	D	M	A	A	V	F	I	N	L	E	D	L	I	K	V	H	H	S	F
Query Conservation																																				.	.
Alig confidence																																				.	.
Template Conservation
Template Sequence		D	K	A	Y	F	I	A	K	E	V	S	T	T	E	R	T	Y	L	K	D	L	E	V	I	T	S	W	F	Q	S	T	V	S	K	E	D	A	M	P	E	A	L	K	S	L	I	F	P	N	F	E	P	L	H	K	F	H	T	N	F
Template Known Secondary structure		S																																	T	T	T		S									S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		539	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	A	I	D	V	S	M	M	A	G	G	S	T	L	A	K	V	F	L	E	F	K	E	R	L	L	I	Y	G	E	Y	C	S	H	M	E	H	A	Q	S	T	L	N	Q	L	L	A	S	R	E	D	F	R	Q	K	V	E	E	C
Query Conservation
Alig confidence													.	.	.
Template Conservation													.	.	.
Template Sequence		L	K	E	I	E	Q	R	L	A	L	W	.	.	.	E	G	D	V	M	L	K	N	I	Q	G	M	K	H	L	A	A	H	L	W	K	H	S	E	A	L	E	A	L	E	N	G	I	K	S	S	R	R	L	E	N	F	C	R	D	F
Template Known Secondary structure													.	.	.												G	G	G	S					T	T											T	T	T	T
Template Predicted Secondary structure													.	.	.
Template SS confidence
		599	600	.	.	.	.	.	.	.	.	.				610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	R	V	Q	D	G	K	F	K	L	Q	D	L	L	V	V	P	M	Q	R	V	L	K	Y	H	L	L	L	K	E	L	L	S	H	S	A	D	R	P	E	R	Q	Q	L	K	E	A	L	E	A	M	Q	D	L	A	M	Y	I	N
Query Conservation
Alig confidence								.																																.	.	.	.	.
Template Conservation								.																																.	.	.	.	.
Template Sequence		E	L	Q	K	V	C	.	Y	L	P	L	N	T	F	L	L	R	P	L	H	R	L	M	H	Y	K	Q	V	L	E	R	L	C	K	H	H	P	R	.	.	.	.	.	D	C	R	A	A	L	A	E	I	T	E	M	V	A	Q	L	H
Template Known Secondary structure			T	S	S	S		.		S		G	G	G	G	G	T																							.	.	.	.	.																T	T
Template Predicted Secondary structure								.																																.	.	.	.	.
Template SS confidence
		669	670	.	.	.	.		.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.						.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	K	R	D	K	E	T	L	K	K	I	S	E	F	Q	C	S	I	E	N	L	Q	V	K	L	E	E	F	G	R	P	K	I	D	G	E	L	K	V	R	S	I	V	N	H	T	K	Q	D	R	Y	L	F	L	F	D	K	V	V
Query Conservation
Alig confidence																								.																.	.
Template Conservation																								.																.	.
Template Sequence		G	T	M	I	K	M	E	N	F	Q	K	L	H	E	L	K	K	D	L	I	G	I	.	D	L	V	V	P	G	R	E	F	I	R	L	G	S	L	.	.	S	K	L	S	G	K	G	L	Q	Q	R	M	F	F	L	F	N	D	V	L
Template Known Secondary structure		T													T	G	G	G	T			S		.					T	T										.	.					S	S	S										S	S
Template Predicted Secondary structure																								.																.	.
Template SS confidence
		729	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750		.	.	.	.	.	.	.	.	.	760	.	.	.	.	.			.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	C	K	R	K	G	Y	S	Y	E	L	K	E	V	I	E	L	L	F	H	K	M	T	D	D	P	M	H	N	K	D	I	K	K	W	S	Y	G	F	Y	L	I	H	L	Q	G	K	Q	G	F	Q	F	F	C	K	T	E	D	M
Query Conservation
Alig confidence						.																											.	.	.	.	.	.	.	.	.	.
Template Conservation						.																											.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Y	T	S	.	R	S	N	Q	F	K	V	H	G	Q	L	P	L	Y	G	M	T	I	E	E	S	E	D	P	H	C	.	.	.	.	.	.	.	.	.	.	L	T	L	R	G	Q	R	Q	S	I	I	V	A	A	S	S	R	S	E
Template Known Secondary structure						.				S										S	S												.	.	.	.	.	.	.	.	.	.						S	S								S	S	S	T	T
Template Predicted Secondary structure						.																											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		787	.	.	790		.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.											.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.
		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	K	W	M	E	Q	F	E	M	A	M	S	N	I	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	E	K	W	V	E	D	I	Q	M	A	I	D	L	A	E
Template Known Secondary structure															S
Template Predicted Secondary structure
Template SS confidence
		844	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D