 |
| Job Description | Q60992 | | Confidence | 97.93% | Date | Wed Jul 10 14:34:39 BST 2013 |
| Rank | 364 | Aligned Residues | 63 |
| % Identity | 14% | Template | c3pe0B_ |
| PDB info |
PDB header:structural protein | Chain: B: PDB Molecule:plectin; |
PDBTitle: structure of the central region of the plakin domain of plectin
|
| Resolution | 2.95 Å |
|
 |
|   |   |
797 | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | |
. | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  | . |
|
|  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| Query Sequence |   |
A | P | F | W | S | V | F | T | P | R | V | I | G | T | A | V | A | R | Y | N | F | A | A | R | D | M | R | E | L | S | L | R | E | G | D | V | V | K | I | Y | S | R | I | G | G | D | Q | G | W | W | K | G | E | T | . |
N | G | R | I | G |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |   |   |
|
|
|
|   |   |
|
|
|
|   |
|
|   |   |   |   |   |
|   |
|
|
|   |
|
|   | . |   |
|
|   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| Template Conservation |   |
  |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|   |
|   | . | . | . |   |   |   |   |   |   |   |   |
|
|
|   |   |   |
|   |   |   |   | . | . |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |
| Template Sequence |   |
V | Q | L | K | P | R | H | P | A | H | P | R | L | P | L | L | A | V | C | D | Y | . |
. |
. |
K | Q | V | E | V | T | V | H | K | G | D | E | C | Q | L | V | G | P | A | . |
. |
Q | P | S | H | W | K | V | L | S | S | S | G | S | E | A |
| Template Known Secondary structure |   |
|
|
| G | G | G | S | T | T |
|
|
|  |  |  |  |  |
| S |
|  | . | . | . |  |
| S | S |
|  |  |
| T | T |
|  |  |  |  |  |  |  |
| . | . | S | T | T |  |  |  |  |  |  | T | T | S |
|  |  |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
| . | . | . |
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
|
| . | . |
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
819 | 820 | . | . | . | . | . | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | |
|
|
840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . | . | . | . | . | . | |
|
. | 860 | . | . | . | . | . | . | . | . | . | 870 | . | . | . |
|   |
|   |   |
856 | . | . | . | 860 | . | . | . | . |
| Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
W | F | P | S | T | Y | V | E | E |
| Query Conservation |   |
  |
|
|
|
|
|
|
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|
|
|   |   |
|   |
|
| Template Sequence |   |
A | V | P | S | V | C | F | L | V |
| Template Known Secondary structure |   |
 |  |  | G | G | G |  |  |
|
| Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|   |   |
877 | . | . | 880 | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|