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Job DescriptionQ60992
Confidence99.62%DateWed Jul 10 14:34:39 BST 2013
Rank92Aligned Residues59
% Identity42%Templatec2js0A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:cytoplasmic protein nck1; PDBTitle: solution structure of second sh3 domain of adaptor nck
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   806...810.........820.........830.........840.........850.........860.....
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Query Sequence  RVIGTAVARYNFAARDMRELSLREGDVVKIYSRIGGDQGWWKGETNGRIGWFPSTYVEEE
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Template Sequence  SLNMPAYVKFNYMAEREDELSLIKGTKVIVMEKC. . SDGWWRGSYNGQVGWFPSNYVTEE
Template Known Secondary structure 
SS
S
B


STTB

B
TT

..SSSTTGGGSS
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   2.......10.........20.........30..... ....40.........50.........
 
   866
Predicted Secondary structure 
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Query Sequence  G
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Template Sequence  G
Template Known Secondary structure 
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   60
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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