 |
| Job Description | Q60992 | | Confidence | 98.38% | Date | Wed Jul 10 14:34:39 BST 2013 |
| Rank | 312 | Aligned Residues | 102 |
| % Identity | 18% | Template | c2hdxB_ |
| PDB info |
PDB header:signaling protein | Chain: B: PDB Molecule:sh2-b ph domain containing signaling mediator 1 |
PDBTitle: crystal structure of the src homology-2 domain of sh2-b in2 complex with jak2 ptyr813 phosphopeptide
|
| Resolution | 2.35 Å |
|
 |
|   |   |
656 | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | |
|
|
680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
I | D | Y | T | A | Y | P | W | F | A | G | N | M | E | R | Q | Q | T | D | N | L | L | K | S | . |
. |
. |
H | A | S | G | T | Y | L | I | R | E | R | P | A | E | A | E | R | F | A | I | S | I | K | F | N | D | E | V | K | H | I | K | V |
| Query Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   | . | . | . |   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|   |   |   |   |
|
|
|
|   |
|   |
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |
|   |   |
|
| Template Sequence |   |
Q | P | L | S | G | Y | P | W | F | H | G | M | L | S | R | L | K | A | A | Q | L | V | L | E | G | G | T | G | S | H | G | V | F | L | V | R | Q | S | E | T | R | R | G | E | C | V | L | T | F | N | F | Q | G | K | A | K | H | L | R | L |
| Template Known Secondary structure |   |
|
| G | G | G | S | T | T | B |
|
| S |
|
|  |  |  |  |  |  |  |  |  | T | T | G | G | G | G | T | T |  |  |  |  |  |  |
| S | S | S | T | T |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . |
|   |
|   |   |
713 | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
V | E | K | D | S | W | I | H | I | T | E | A | K | K | F | E | S | L | L | E | L | V | E | Y | Y | Q | C | H | S | L | K | E | S | F | K | Q | L | D | T | T | L | K | F | P | Y |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |
|
|
|   |
| Template Sequence |   |
S | L | N | A | A | G | Q | C | R | V | Q | H | L | H | F | Q | S | I | F | D | M | L | E | H | F | R | V | H | P | I | P | L | E | S | S | D | V | V | L | V | S | Y | V | P | S |
| Template Known Secondary structure |   |
 |  |
| T | T |
|
|  |  |  | T | T |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  | S |
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
| Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|