Job Description Q60992 Confidence 100.00% Date Wed Jul 10 14:34:39 BST 2013 Rank 8 Aligned Residues 319 % Identity 26% Template c2dfkA_ PDB info PDB header:cell cycle Chain: A: PDB Molecule:collybistin ii; PDBTitle: crystal structure of the cdc42-collybistin ii complex Resolution 2.15 Å Model Dimensions (Å) X:64.721 Y:88.318 Z:59.100

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		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.				.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																											.	.	.
Query SS confidence																																											.	.	.
Query Sequence		K	M	G	M	T	E	D	D	K	R	S	C	C	L	L	E	I	Q	E	T	E	A	K	Y	Y	R	T	L	E	D	I	E	K	N	Y	M	G	P	L	R	L	.	.	.	V	L	S	P	A	D	M	A	A	V	F	I	N	L	E	D
Query Conservation																																											.	.	.
Alig confidence																																											.	.	.
Template Conservation
Template Sequence		R	P	L	Q	N	R	D	Q	M	R	A	N	V	I	N	E	I	M	S	T	E	R	H	Y	I	K	H	L	K	D	I	C	E	G	Y	L	K	Q	C	R	K	R	R	D	M	F	S	D	E	Q	L	K	V	I	F	G	N	I	E	D
Template Known Secondary structure																																				T								T	T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.				.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		L	I	K	V	H	H	S	F	L	R	A	I	D	V	S	M	M	A	G	G	.	.	.	S	T	L	A	K	V	F	L	E	F	K	E	R	L	L	I	Y	G	E	Y	C	S	H	M	E	H	A	Q	S	T	L	N	Q	L	L	A	S
Query Conservation																						.	.	.
Alig confidence																						.	.	.																																					.
Template Conservation																																																													.
Template Sequence		I	Y	R	F	Q	M	G	F	V	R	D	L	E	K	Q	Y	N	N	D	D	P	H	L	S	E	I	G	P	C	F	L	E	H	Q	D	G	F	W	I	Y	S	E	Y	C	N	N	H	L	D	A	C	M	E	L	S	K	L	M	K	.
Template Known Secondary structure																			S	S		G	G	G										T	T	T	G	G	G																				T	T	.
Template Predicted Secondary structure																																																													.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		R	E	D	F	R	Q	K	V	E	E	C	T	L	R	V	Q	D	G	K	F	K	L	Q	D	L	L	V	V	P	M	Q	R	V	L	K	Y	H	L	L	L	K	E	L	L	S	H	S	A	.	D	R	P	E	R	Q	Q	L	K	E	A
Query Conservation																																																		.
Alig confidence																																																		.
Template Conservation
Template Sequence		D	S	R	Y	Q	H	F	F	E	A	C	R	L	L	Q	Q	M	I	D	I	A	I	D	G	F	L	L	T	P	V	Q	K	I	C	K	Y	P	L	Q	L	A	E	L	L	K	Y	T	A	Q	D	H	S	D	Y	R	Y	V	A	A	A
Template Known Secondary structure		S														T	T			S								T																			T	S		T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.			.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure																																						.	.
Query SS confidence																																						.	.
Query Sequence		L	E	A	M	Q	D	L	A	M	Y	I	N	E	V	K	R	D	K	E	T	L	K	K	I	S	E	F	Q	C	S	I	E	N	L	Q	V	.	.	K	L	E	E	F	G	R	P	K	I	D	G	E	L	K	V	R	S	I	V	N	H
Query Conservation																																						.	.
Alig confidence																																						.	.
Template Conservation
Template Sequence		L	A	V	M	R	N	V	T	Q	Q	I	N	E	R	K	R	R	L	E	N	I	D	K	I	A	Q	W	Q	A	S	V	L	D	W	E	G	D	D	I	L	D	R	S	S	E	L	I	Y	T	G	E	M	A	W	I	Y	Q	P	Y	G
Template Known Secondary structure																					T											S	B	T			S	S		G	G	G	T														S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.				.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.			.	.	.	.	470
Predicted Secondary structure																					.	.	.																																.	.
Query SS confidence																					.	.	.																																.	.
Query Sequence		T	K	Q	D	R	Y	L	F	L	F	D	K	V	V	I	V	C	K	R	.	.	.	K	G	Y	S	Y	E	L	K	E	V	I	E	L	L	F	H	K	M	T	D	D	P	M	H	N	K	D	I	K	K	W	.	.	S	Y	G	F	Y
Query Conservation																					.	.	.																																.	.
Alig confidence																					.	.	.																																.	.
Template Conservation
Template Sequence		R	N	Q	Q	R	V	F	F	L	F	D	H	Q	M	V	L	C	K	K	D	L	I	R	R	D	I	L	Y	Y	K	G	R	I	D	M	D	K	Y	E	V	I	D	I	E	D	G	R	D	D	D	F	N	V	S	M	K	N	A	F	K
Template Known Secondary structure												T	T									S	S		T	T										G	G	G								S				S	S	S					S	S
Template Predicted Secondary structure
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	H	L	Q	G	K	Q	G	F	Q	F	F	C	K	T	E	D	M	K	R	K	W	M	E	Q	F	E	M	A	M	S	N	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	H	N	K	E	T	E	E	V	H	L	F	F	A	K	K	L	E	E	K	I	R	W	L	R	A	F	R	E	E	R	K	M	V
Template Known Secondary structure					S	S	S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D