Job Description Q60992 Confidence 99.78% Date Wed Jul 10 14:34:39 BST 2013 Rank 56 Aligned Residues 130 % Identity 29% Template c1ov3A_ PDB info PDB header:oxidoreductase activator Chain: A: PDB Molecule:neutrophil cytosol factor 1; PDBTitle: structure of the p22phox-p47phox complex Resolution 1.80 Å

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		577	.	.	580	.	.	.	.	.	.	.	.	.	590			.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		P	G	P	K	M	V	A	V	Q	N	Y	H	G	N	.	.	P	A	P	P	G	K	P	V	L	T	F	Q	T	G	D	V	I	E	L	L	R	G	D	P	D	S	P	W	W	E	G	R	L	V	Q	T	R	K	S	G	Y	F	P	S
Query Conservation																.	.
Alig confidence																.	.																											.							.	.
Template Conservation																																												.							.	.
Template Sequence		G	S	P	E	F	I	I	L	Q	T	Y	R	A	I	A	D	Y	E	K	T	S	G	S	E	M	A	L	S	T	G	D	V	V	E	V	V	E	K	S	E	S	G	.	W	W	F	C	Q	M	.	.	K	A	K	R	G	W	I	P	A
Template Known Secondary structure																S		B			S	S	T	T	S			B		T	T										T	T	S	.							.	.									G
Template Predicted Secondary structure																																												.							.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.			.	200	.	.	.	.	.	.	.
		635	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	V	K	P	C	P	V	D	G	R	P	P	T	G	R	P	P	S	R	E	I	D	Y	T	A	Y	P	W	F	A	G	N	M	E	R	Q	Q	T	D	N	L	L	K	S	H	A	S	G	T	Y	L	I	R	E	R	P	A	E	A
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	F	L	E	P	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G	G				S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		208	.	210	.	.	.	.
		695	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	F	A	I	S	I	K	F	N	D	E	V	K	H	I	K	V	V	E	K	D	S	W	I	H	I	T	E	A	K	K	F	E	S	L	L	E	L	V	E	Y	Y	Q	C	H	S	L	K	E	S	F	K	Q	L	D	T	T	L	K
Query Conservation
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		755	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	Y	K	S	R	E	R	T	T	S	R	A	S	S	R	S	P	A	S	C	A	S	Y	N	F	S	F	L	S	P	Q	G	L	S	F	A	P	Q	A	P	S	A	P	F	W	S	V	F	T	P	R	V	I	G	T	A	V	A	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	D	E	T	E	D	P	E	P	N	Y	A	G	E	P	Y	V	A	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S			S					T	T							S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																										215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		815	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	N	F	A	A	R	D	M	R	E	L	S	L	R	E	G	D	V	V	K	I	Y	S	R	I	G	G	D	Q	G	W	W	K	G	E	T	N	G	R	I	G	W	F	P	S	T	Y	V	E	E
Query Conservation
Alig confidence																											.	.
Template Conservation																											.	.
Template Sequence		K	A	Y	T	A	V	E	G	D	E	V	S	L	L	E	G	E	A	V	E	V	I	H	K	L	.	.	L	D	G	W	W	V	I	R	K	D	D	V	T	G	Y	F	P	S	M	Y	L	Q	K
Template Known Secondary structure		S		B				S	T	T	B			B		T	T										.	.	T	T	S							T	T							G	G	G
Template Predicted Secondary structure																											.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.			260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D