Job Description Q60992 Confidence 100.00% Date Wed Jul 10 14:34:39 BST 2013 Rank 24 Aligned Residues 288 % Identity 19% Template c1ntyA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:triple functional domain protein; PDBTitle: crystal structure of the first dh/ph domain of trio to 1.7 a Resolution 1.70 Å

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		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.							.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.
Query Sequence		K	R	S	C	C	L	L	E	I	Q	E	T	E	A	K	Y	Y	R	T	L	E	D	I	E	K	N	Y	M	G	P	L	R	L	.	.	.	.	.	.	V	L	S	P	A	D	M	A	A	V	F	I	N	L	E	D	L	I	K	V	H
Query Conservation																																			.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.
Template Conservation
Template Sequence		R	K	E	F	I	M	A	E	L	I	Q	T	E	K	A	Y	V	R	D	L	R	E	C	M	D	T	Y	L	W	E	M	T	S	G	V	E	E	I	P	P	G	I	V	N	K	E	L	I	I	F	G	N	M	Q	E	I	Y	E	F	H
Template Known Secondary structure																																					S				T	T	T	T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		1233	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	F	L	R	A	I	D	V	S	M	M	A	G	G	S	T	L	A	K	V	F	L	E	F	K	E	R	L	L	I	Y	G	E	Y	C	S	H	M	E	H	A	Q	S	T	L	N	Q	L	L	A	S	R	E	D	F	R	Q	K	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	N	I	F	L	K	E	L	E	K	Y	E	Q	L	P	E	D	V	G	H	C	F	V	T	W	A	D	K	F	Q	M	Y	V	T	Y	C	K	N	K	P	D	S	T	Q	L	I	L	E	H	A	G	S	Y	F	D	E	I	Q	Q	R
Template Known Secondary structure				T								T	T	T		G	G	G	T							T	T	T	T	T																					T	T	T
Template Predicted Secondary structure
Template SS confidence
		1293	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		E	E	C	T	L	R	V	Q	D	G	K	F	K	L	Q	D	L	L	V	V	P	M	Q	R	V	L	K	Y	H	L	L	L	K	E	L	L	S	H	S	A	.	D	R	P	E	R	Q	Q	L	K	E	A	L	E	A	M	Q	D	L	A
Query Conservation																																										.
Alig confidence		.	.	.	.	.	.	.																																		.					.	.	.
Template Conservation		.	.	.	.	.	.	.																																							.	.	.
Template Sequence		.	.	.	.	.	.	.	H	G	L	A	N	S	I	S	S	Y	L	I	K	P	V	Q	R	I	T	K	Y	Q	L	L	L	K	E	L	L	T	C	C	E	E	G	K	G	E	.	.	.	I	K	D	G	L	E	V	M	L	S	V	P
Template Known Secondary structure		.	.	.	.	.	.	.		T		S	S							T																			T	S		T	T		T	T	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.																																							.	.	.
Template SS confidence
									1353	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390				.	.	.	.	.	.	.	.	.	1400	.	.
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.			.	.	420	.	.	.
Predicted Secondary structure																																																						.	.
Query SS confidence																																																						.	.
Query Sequence		M	Y	I	N	E	V	K	R	D	K	E	T	L	K	K	I	S	E	F	Q	C	S	I	E	N	L	Q	V	K	L	E	E	F	G	R	P	K	I	D	G	E	L	K	V	R	S	I	V	N	H	T	K	.	.	Q	D	R	Y	L	F
Query Conservation																																																						.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.																															.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	R	A	N	D	A	M	H	L	S	M	.	.	.	.	.	.	.	.	.	.	.	L	E	G	F	D	E	N	I	E	S	Q	G	E	L	I	L	Q	E	S	F	Q	V	W	D	P	K	T	L	I	R	K	G	R	E	R	H	L	F
Template Known Secondary structure											T	T	.	.	.	.	.	.	.	.	.	.	.			S			S		S	G	G	G														S	S	S	S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1403	.	.	.	.	.	.	1410	.	.	.												.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.						.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.		.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.																																			.
Query SS confidence																	.	.	.	.	.																																			.
Query Sequence		L	F	D	K	V	V	I	V	C	K	R	K	G	Y	S	.	.	.	.	.	Y	E	L	K	E	V	I	E	L	L	F	H	K	M	T	D	D	P	M	H	N	K	D	I	K	K	W	S	Y	G	F	Y	L	I	.	H	L	Q	G	K
Query Conservation																	.	.	.	.	.																																			.
Alig confidence																	.	.	.	.	.																			.	.	.	.													.
Template Conservation																																								.	.	.	.
Template Sequence		L	F	E	M	S	L	V	F	S	K	E	V	K	D	S	S	G	R	S	K	Y	L	Y	K	S	K	L	F	T	S	E	L	G	V	T	E	H	V	.	.	.	.	E	G	D	P	C	K	F	A	L	W	V	G	R	T	P	T	S	D
Template Known Secondary structure				S	S											T	T													G	G	G								.	.	.	.	T	T		T	T							S	S	S			T	T
Template Predicted Secondary structure																																								.	.	.	.
Template SS confidence
		1452	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.					1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	F	Q	F	F	C	K	T	E	D	M	K	R	K	W	M	E	Q	F	E	M	A	M	S	N	I	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	K	I	V	L	K	A	S	S	I	E	N	K	Q	D	W	I	K	H	I	R	E	V	I	Q	E	R	T
Template Known Secondary structure		T							S	S																		T
Template Predicted Secondary structure
Template SS confidence
		1508	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D