 |
| Job Description | Q8CG79 | | Confidence | 38.58% | Date | Tue Jul 30 13:24:09 BST 2013 |
| Rank | 472 | Aligned Residues | 41 |
| % Identity | 24% | Template | d1czda1 |
| SCOP info | DNA clamp
| DNA clamp
| DNA polymerase processivity factor
|
| Resolution | 2.45 |
|
 |
|   |   |
1058 | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 1080 | . | . | . | . | . | . | . | . | . | 1090 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
N | K | G | V | I | Y | A | L | W | D | Y | E | P | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
H | D | D | E | L | L | M | K | E | G | D | C | M | T | V | I | R | R | E | D | E | E | E | I | E |
| Query Conservation |   |
  |   |
|   |
|   |
|   |   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |
|
|
|
|
|
|   |
|   |
|   |   |
|   |   |
|
|
|
|   |   |
|
|   |
|
|   |
|   |   |   |   |
|
|
|   |   |   |   |   |   |   |
|   |
| . | . |   |   |   |
|   |   |   |   |
| Template Sequence |   |
V | N | G | T | T | Y | A | E | A | N | I | S | D | V | I | D | F | D | V | A | I | Y | D | L | N | G | F | L | G | I | L | S | L | V | N | D | D | A | E | I | S | Q | S | E | D | G | N | I | K | I | . |
. |
A | D | A | R | S | T | I | F |
| Template Known Secondary structure |   |
T | T | S | S |
|  |  |  |  |  |  |  |  |  |  |
| S |
|  |  |  | S |
|  |  |  |  |  |  |  |  | T | T | S |
| T | T |
|  |  |  |  |
| T | T | S | S |  |  |  | . | . |  |
| S | S |
|  |  |  |
| Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  | . | . |
|
|
|
|  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
1034 | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | . | . | |
|
. | . | . | . | . | . | 1090 | . |
|   |
|   |   |
1097 | . | . | 1100 |
| Predicted Secondary structure |   |
|
|  |  |
| Query SS confidence |   |
|
|
|
|
| Query Sequence |   |
W | W | W | A |
| Query Conservation |   |
|
|
|   |
| Alig confidence |   |
|
|
|
|
| Template Conservation |   |
  |   |   |
|
| Template Sequence |   |
W | P | A | A |
| Template Known Secondary structure |   |
 |
|
|
|
| Template Predicted Secondary structure |   |
 |  |
|
|
| Template SS confidence |   |
|
|
|
|
|   |   |
1092 | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|