Return to main results Retrieve Phyre Job Id

Job DescriptionQ8CG79
Confidence38.58%DateTue Jul 30 13:24:09 BST 2013
Rank472Aligned Residues41
% Identity24%Templated1czda1
SCOP infoDNA clamp DNA clamp DNA polymerase processivity factor
Resolution2.45

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1058.1060.........1070. ........1080.........1090......
Predicted Secondary structure 








.....................


















Query SS confidence 













. . . . . . . . . . . . . . . . . . . . .
























Query Sequence  NKGVIYALWDYEPQ. . . . . . . . . . . . . . . . . . . . . HDDELLMKEGDCMTVIRREDEEEIE
Query Conservation    
 
 
   
   .....................  


           
     
  
Alig confidence 













.....................














..







Template Conservation       





 
 
  
  



  

 

 
    


       
 
..   
    
Template Sequence  VNGTTYAEANISDVIDFDVAIYDLNGFLGILSLVNDDAEISQSEDGNIKI. . ADARSTIF
Template Known Secondary structure  TTSS

S
S
TTS
TT

TTSS..
SS
Template Predicted Secondary structure 



















..



Template SS confidence 



























































   1034.....1040.........1050.........1060.........1070.........1080... ......1090.
 
   1097..1100
Predicted Secondary structure 

Query SS confidence 



Query Sequence  WWWA
Query Conservation 


 
Alig confidence 



Template Conservation     
Template Sequence  WPAA
Template Known Secondary structure 


Template Predicted Secondary structure 

Template SS confidence 



   1092...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D