Job Description Q8CG79 Confidence 99.69% Date Tue Jul 30 13:24:09 BST 2013 Rank 12 Aligned Residues 167 % Identity 20% Template c3ui2A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:signal recognition particle 43 kda protein, chloroplastic; PDBTitle: crystal structure of the cpsrp54 tail bound to cpsrp43 Resolution 3.18 Å Model Dimensions (Å) X:66.255 Y:44.344 Z:36.097

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		930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		L	L	D	S	S	L	E	G	E	F	D	L	V	Q	R	I	I	Y	E	V	D	D	P	S	L	P	N	D	E	G	I	T	A	L	H	N	A	V	C	A	G	H	T	E	I	V	K	F	L	V	Q	F	G	V	N	V	N	A	A	.
Query Conservation																																																													.
Alig confidence																					.																																								.
Template Conservation																					.
Template Sequence		W	W	T	A	A	R	K	A	D	E	Q	A	L	S	Q	L	L	E	D	.	R	D	V	D	A	V	D	E	N	G	R	T	A	L	L	F	V	A	G	L	G	S	D	K	C	V	R	L	L	A	E	A	G	A	D	L	D	H	R	D
Template Known Secondary structure							T	T	T								T	T	T	T	.			T	T		B		T	T	S		B									T											T	T			T	T
Template Predicted Secondary structure																					.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		989	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	D	G	W	T	P	L	H	C	A	A	S	C	N	N	V	Q	V	C	K	F	L	V	E	S	G	A	A	V	F	A	M	T	Y	S	D	M	Q	T	A	A	D	K	C	E	E	M	E	E	G	Y	T	Q	C	S	Q	F	L	Y
Query Conservation
Alig confidence																																					.
Template Conservation																																					.
Template Sequence		M	R	G	G	L	T	A	L	H	M	A	A	G	Y	V	R	P	E	V	V	E	A	L	V	E	L	G	A	D	I	E	V	E	D	E	.	R	G	L	T	A	L	E	L	A	R	E	I	L	K	T	T	P	K	G	N	P	M	Q	F
Template Known Secondary structure		S	S	S											T	T											T	T			T	T				T	.	T													T	T				S	S
Template Predicted Secondary structure																																					.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		1049	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.		.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		G	V	Q	E	K	M	G	I	M	N	K	G	V	I	Y	A	L	W	D	Y	.	E	P	Q	H	D	D	E	L	L	M	K	E	G	D	C	M	T	V	I	R	R	E	D	E	E	E	I	E	W	W
Query Conservation																						.
Alig confidence																						.
Template Conservation
Template Sequence		G	R	R	I	G	L	E	K	V	I	N	V	L	E	G	Q	V	F	E	Y	A	E	V	D	E	I	V	E	K	R	G	K	G	K	D	V	E	Y	L	V	R	W	K	D	G	G	D	C	E	W	V
Template Known Secondary structure																																S		T	T	S								S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D