Job Description Q8CG79 Confidence 91.41% Date Tue Jul 30 13:24:09 BST 2013 Rank 346 Aligned Residues 84 % Identity 15% Template c3swkB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:vimentin; PDBTitle: crystal structure of vimentin coil1b fragment Resolution 1.70 Å

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Show / Hide Conservation and Alignment quality

		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	A	L	K	G	H	V	E	Q	K	R	L	S	N	G	K	L	V	E	E	I	E	Q	M	N	S	L	F	Q	Q	K	Q	R	E	L	V	L	A	V	S	K	V	E	E	L	T	R	Q	L	E	M	L	K	N	G	R	I	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	R	E	L	R	R	Q	V	D	Q	L	T	N	D	K	A	R	V	E	V	E	R	D	N	L	A	E	D	I	M	R	L	R	E	K	L	Q	E	E	M	L	Q	R	E	E	A	E	N	T	L	Q	S	F	R	Q	D	V	D	N	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	H	D	N	Q	S	A	V	A	E	L	D	R	L	Y	K	E	L	Q	L	R	N	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	A	R	L	D	L	E	R	K	V	E	S	L	Q	E	E	I	A	F	L	K	K	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D