Job Description Q8CG79 Confidence 82.43% Date Tue Jul 30 13:24:09 BST 2013 Rank 368 Aligned Residues 99 % Identity 20% Template c3mkqB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:coatomer subunit alpha; PDBTitle: crystal structure of yeast alpha/betaprime-cop subcomplex of the copi2 vesicular coat Resolution 2.50 Å

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		930	.	.	.	.	.	.		.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		L	L	D	S	S	L	E	.	G	E	F	D	L	V	Q	R	I	I	Y	E	V	D	D	P	S	L	P	N	D	E	G	I	T	A	L	H	N	A	V	C	A	G	H	T	E	I	V	K	F	L	V	Q	F	G	V	N	V	N	A	A
Query Conservation									.
Alig confidence									.																.	.	.	.	.									.	.														.	.	.	.
Template Conservation																									.	.	.	.	.									.	.														.	.	.	.
Template Sequence		L	I	Q	E	A	L	A	Q	G	N	A	S	L	A	E	M	I	Y	Q	T	Q	H	S	.	.	.	.	.	F	D	K	L	S	F	L	Y	.	.	L	V	T	G	D	V	N	K	L	S	K	M	Q	.	.	.	.	N	I	A	Q	T
Template Known Secondary structure									T	T												T	T		.	.	.	.	.									.	.				T										.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.									.	.														.	.	.	.
Template SS confidence
		681	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.						.	.	.	.	.	.	710	.			.	.	.	.	.	.	.	.	720	.	.	.	.					.	.	.	.	.
		989	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.						.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		D	S	D	G	W	T	P	L	H	C	A	A	S	C	N	N	V	Q	V	C	K	F	L	V	E	.	.	.	.	.	S	G	A	A	V	F	A	M	T	Y	S	D	M	Q	T	A	A	D	K	C	E	E	M	E	E	G
Query Conservation																											.	.	.	.	.
Alig confidence																											.	.	.	.	.
Template Conservation
Template Sequence		R	E	D	F	G	S	M	L	L	N	T	F	Y	N	N	S	T	K	E	R	S	S	I	F	A	E	G	G	S	L	P	L	A	Y	A	V	A	K	A	N	G	D	E	A	A	A	S	A	F	L	E	Q	A	E	V	D
Template Known Secondary structure		T	T													T												T	T												T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D