Job Description Q8CG79 Confidence 54.84% Date Tue Jul 30 13:24:09 BST 2013 Rank 413 Aligned Residues 85 % Identity 22% Template c3mkqA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:coatomer beta'-subunit; PDBTitle: crystal structure of yeast alpha/betaprime-cop subcomplex of the copi2 vesicular coat Resolution 2.50 Å

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		928	.	930	.	.	.	.	.	.		.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		A	L	L	L	D	S	S	L	E	.	G	E	F	D	L	V	Q	R	I	I	Y	E	V	D	D	P	S	L	P	N	D	E	G	I	T	A	L	H	N	A	V	C	A	G	H	T	E	I	V	K	F	L	V	Q	F	G	V	N	V	N
Query Conservation											.
Alig confidence											.																.	.	.	.	.											.	.											.	.	.	.
Template Conservation																											.	.	.	.	.											.	.											.	.	.	.
Template Sequence		R	A	L	G	D	A	S	L	Q	R	F	N	F	K	L	A	I	E	A	F	T	N	A	H	D	.	.	.	.	.	L	E	S	L	F	L	L	H	S	S	.	.	F	N	N	K	E	G	L	V	T	L	.	.	.	.	A	K	D	A
Template Known Secondary structure											T	T													T		.	.	.	.	.											.	.	T	T									.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.											.	.											.	.	.	.
Template SS confidence
		685	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.						710	.	.	.	.	.	.	.	.	.			720	.	.	.	.	.	.	.	.	.					730	.	.	.
		987	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.		.	.	1010	.	.	.	.	.					.	.	.	.	1020	.	.	.
Predicted Secondary structure																							.									.	.	.	.
Query SS confidence																							.									.	.	.	.
Query Sequence		A	A	D	S	D	G	W	T	P	L	H	C	A	A	S	C	N	N	V	Q	V	.	C	K	F	L	V	E	S	G	.	.	.	.	A	A	V	F	A	M	T	Y
Query Conservation																							.									.	.	.	.
Alig confidence																							.									.	.	.	.
Template Conservation
Template Sequence		E	T	T	G	K	F	N	L	A	F	N	A	Y	W	I	A	G	D	I	Q	G	A	K	D	L	L	I	K	S	Q	R	F	S	E	A	A	F	L	G	S	T	Y
Template Known Secondary structure				T	T													T												T	T												T
Template Predicted Secondary structure
Template SS confidence
		734	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D