Job Description Q8CG79 Confidence 66.65% Date Tue Jul 30 13:24:09 BST 2013 Rank 390 Aligned Residues 248 % Identity 11% Template c3hajA_ PDB info PDB header:endocytosis Chain: A: PDB Molecule:human pacsin2 f-bar; PDBTitle: crystal structure of human pacsin2 f-bar domain (p2121212 lattice) Resolution 2.78 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	M	F	D	V	L	Q	R	F	G	S	Q	R	N	E	V	R	F	F	L	R	H	E	R	P	P	N	R	D	I	V	S	G	P	R	S	Q	D	P	S	V	K	R	N	G	V	K	V	P	G	E	H	R	R	K	E	N	G	V
Query Conservation
Alig confidence																										.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.
Template Sequence		K	R	T	V	K	R	I	D	D	G	H	R	L	C	S	D	L	M	N	C	L	H	E	R	.	.	.	.	.	.	A	R	I	E	K	A	Y	A	Q	Q	L	T	E	W	A	R	R	W	R	Q	L	V	E	K	G	P	Q	Y	G	T
Template Known Secondary structure																										.	.	.	.	.	.																								S	S	S			S
Template Predicted Secondary structure																										.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.							50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	P	R	L	D	L	T	L	A	E	L	Q	E	M	A	S	R	Q	Q	Q	Q	I	E	A	Q	Q	Q	M	L	A	T	K	E	Q	R	L	K	F	L	K	Q	Q	D	Q	R	Q	Q	Q	Q	A	A	E	Q	E	K	L	K	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	K	A	W	M	A	F	M	S	E	A	E	R	V	S	E	L	H	L	E	V	K	A	S	L	M	N	D	D	F	E	K	I	K	N	W	Q	K	E	A	F	H	K	Q	M	M	G	G	F	K	E	T	K	E	A	E	D	G	F
Template Known Secondary structure																														T															B		S	S	S	S	B
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	I	A	E	S	Q	E	A	K	L	K	K	V	R	A	L	K	G	H	V	E	Q	K	R	L	S	N	G	K	L	V	E	E	I	E	Q	M	N	S	L	F	Q	Q	K	Q	R	E	L	V	L	A	V	S	K	V	E	E	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	K	A	Q	K	P	W	A	K	K	L	K	E	V	E	A	A	K	K	A	H	H	A	A	C	K	E	E	K	L	A	I	S	R	E	A	N	S	K	A	D	P	S	L	N	P	E	Q	L	K	K	L	Q	D	K	I	E	K	C	K
Template Known Secondary structure																																													S		S
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		R	Q	L	E	M	L	K	N	G	R	I	D	G	H	H	D	N	Q	S	A	V	A	E	L	D	R	L	Y	K	E	L	Q	L	R	N	K	L	N	Q	E	Q	N	A	K	L	Q	Q	Q	R	E	C	L	N	K	R	N	S	E	V	.
Query Conservation																																																													.
Alig confidence																												.	.																																.
Template Conservation																												.	.
Template Sequence		Q	D	V	L	K	T	K	E	K	Y	E	K	S	L	K	E	L	D	Q	G	T	P	Q	Y	M	E	.	.	N	M	E	Q	V	F	E	Q	C	Q	Q	F	E	E	K	R	L	R	F	F	R	E	V	L	L	E	V	Q	K	H	L	D
Template Known Secondary structure																				T	T	S						.	.
Template Predicted Secondary structure																												.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.			.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	M	D	K	R	V	S	E	L	R	D	R	L	W	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	N	V	A	G	Y	K	A	I	Y	H	D	L	E	Q	S
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D