Job Description Q8CG79 Confidence 45.17% Date Tue Jul 30 13:24:09 BST 2013 Rank 443 Aligned Residues 78 % Identity 31% Template c3b49A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lin2189 protein; PDBTitle: crystal structure of an uncharacterized conserved protein from2 listeria innocua Resolution 1.60 Å

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		1032	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.														.	.	.	.	.	.	1070	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Query Sequence		K	C	E	E	M	E	E	G	Y	T	Q	C	S	Q	F	L	Y	G	V	Q	E	K	M	G	I	M	N	K	G	V	I	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	W	D	Y	E	P	Q	H	D	.	.	.	.	.
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template Conservation
Template Sequence		K	G	D	P	D	G	E	E	Y	Q	K	A	V	Q	S	L	Y	A	I	A	Y	T	I	K	X	S	K	X	G	E	T	R	L	D	G	Y	S	D	F	V	V	P	P	L	E	G	F	W	W	S	E	G	K	F	D	L	K	D	R	D
Template Known Secondary structure			S		T	T	S																				G	G	G	S			T	T	T	T	S			B												S	S	S			T	T		G	G
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
																																					1074	.	.	.				.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	L	L	.	.	.	M	K	E	G	D	C	M	T	V	I	R	R	E	D	E	E	E	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.
Template Conservation
Template Sequence		A	W	L	W	T	S	I	L	R	Q	P	D	F	V	T	E	E	V	L	E	W	A	K	E	V	A	R	K	K	K	P	D	V	D	T	S	R	V	K	L	V	R	F	E	E	G	E	C	V	Q	X	X	H	V	G	P	F	S	E	E
Template Known Secondary structure		G											T	T																		T	T	S			T	T																		S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		1096	.	.	.	1100	.	.	.				.	.	.	.	.	.
Predicted Secondary structure										.	.	.
Query SS confidence										.	.	.
Query Sequence		E	W	W	W	A	R	L	N	.	.	.	D	K	E	G	Y	V
Query Conservation										.	.	.
Alig confidence										.	.	.
Template Conservation
Template Sequence		V	H	T	V	A	E	X	H	Q	F	X	E	T	E	G	L	R
Template Known Secondary structure																T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D