Job Description Q8CG79 Confidence 37.13% Date Tue Jul 30 13:24:09 BST 2013 Rank 479 Aligned Residues 137 % Identity 10% Template c2p22C_ PDB info PDB header:transport protein Chain: C: PDB Molecule:protein srn2; PDBTitle: structure of the yeast escrt-i heterotetramer core Resolution 2.70 Å

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		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	R	L	K	F	L	K	Q	Q	D	Q	R	Q	Q	Q	Q	A	A	E	Q	E	K	L	K	R	L	R	E	I	A	E	S	Q	E	A	K	L	K	K	V	R	A	L	K	G	H	V	E	Q	K	R	L	S	N	G	K	L	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	I	I	D	L	I	Q	T	H	R	H	Q	L	E	L	Y	V	T	K	F	N	P	L	T	D	F	A	G	K	I	H	A	F	R	D	Q	F	K	Q	L	E	E	N	F	E	D	L	H	E	Q	K	D	K	V	Q	A	L	L	E
Template Known Secondary structure																			G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.								.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.																						.	.
Query SS confidence																									.	.	.	.	.	.	.																						.	.
Query Sequence		E	I	E	Q	M	N	S	L	F	Q	Q	K	Q	R	E	L	V	L	A	V	S	K	V	.	.	.	.	.	.	.	E	E	L	T	R	Q	L	E	M	L	K	N	G	R	I	D	G	H	H	D	N	.	.	Q	S	A	V	A	E	L
Query Conservation																									.	.	.	.	.	.	.																						.	.
Alig confidence																									.	.	.	.	.	.	.																						.	.
Template Conservation
Template Sequence		N	A	R	I	L	E	S	K	Y	V	A	S	W	Q	D	Y	H	S	E	F	S	K	K	Y	G	D	I	A	L	K	K	K	L	E	Q	N	T	K	K	L	D	E	E	S	S	Q	L	E	T	T	T	R	S	I	D	S	A	D	D	L
Template Known Secondary structure																								T	S	S																									S		S
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	L	Y	K	E	L	Q	L	R	N	K	L	N	Q	E	Q	N	A	K	L	Q	Q	Q	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Q	F	I	K	N	Y	L	D	I	R	T	Q	Y	H	L	R	R	E	K	L	A	T	W	D	K
Template Known Secondary structure																										T	T
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D