Return to main results Retrieve Phyre Job Id

Job DescriptionQ8CG79
Confidence99.06%DateTue Jul 30 13:24:09 BST 2013
Rank215Aligned Residues59
% Identity37%Templatec2jteA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:cd2-associated protein; PDBTitle: third sh3 domain of cd2ap
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1055....1060... ......1070.........1080.........1090.........1100.........1110...
Predicted Secondary structure 




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Query Sequence  GIMNKGVIY. ALWDYEPQHDDELLMKEGDCMTVIRREDEEEIEWWWARLNDKEGYVPRNL
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Template Sequence  GAMGAKEYCRTLFPYTGTNEDELTFREGEIIHLISKETGE. AGWWKGELNGKEGVFPDNF
Template Known Secondary structure 



SSSS
B

SSSSB

B
TT
S
SSS.TTTTGGG
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   1........10.........20.........30.........40 .........50.........
 
   1114
Predicted Secondary structure 
Query SS confidence 
Query Sequence  L
Query Conservation 
Alig confidence 
Template Conservation 
Template Sequence  A
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   60
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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