Job Description Q8CG79 Confidence 99.42% Date Tue Jul 30 13:24:09 BST 2013 Rank 48 Aligned Residues 85 % Identity 18% Template c2f37B_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:transient receptor potential cation channel PDBTitle: crystal structure of the ankyrin repeat domain of human2 trpv2 Resolution 1.70 Å

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		929	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	L	D	S	S	L	E	G	E	F	D	L	V	Q	R	I	I	Y	E	V	D	D	P	S	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	H	I	A	I	E	K	R	S	L	Q	C	V	K	L	L	V	E	N	G	A	N	V	H	A	R	A	C	G	R	F	F	Q	K	G	Q	G	T	C	F	Y	F	G	E	L	P	L	S	L	A	A	C	T	K	Q	W	D	V	V
Template Known Secondary structure									T	T											T	T			T	T					S	G	G	G		T	T	S	S	S	S			S		S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
																																		956	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	E	G	I	T	A	L	H	N	A	V	C	A	G	H	T	E	I	V	K	F	L	V	Q	F	G	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	Y	L	L	E	N	P	H	Q	P	A	S	L	Q	A	T	D	S	Q	G	N	T	V	L	H	A	L	V	X	I	S	D	N	S	A	E	N	I	A	L	V	T	S	X	Y	D	G	L	L	Q	A	G	A	R	L	C	P	T	V	Q
Template Known Secondary structure								S	S					T	T				T	T	S													S																							S	T	T
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		984	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	N	A	A	D	S	D	G	W	T	P	L	H	C	A	A	S	C	N	N	V	Q	V	C	K	F	L	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	D	I	R	N	L	Q	D	L	T	P	L	K	L	A	A	K	E	G	K	I	E	I	F	R	H	I	L	Q
Template Known Secondary structure		G	G	G				T	T	S										T	T
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D