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Job DescriptionQ8CG79
Confidence97.16%DateTue Jul 30 13:24:09 BST 2013
Rank307Aligned Residues283
% Identity11%Templatec2dfsA_
PDB info PDB header:contractile protein/transport proteinChain: A: PDB Molecule:myosin-5a; PDBTitle: 3-d structure of myosin-v inhibited state
Resolution24.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   3940.........50.........60.........70.........80.........90........
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Query Sequence  GENDCHLAEVWCGSERPVADNERMFDVLQRFGSQRNEVRFFLRHERPPNRDIVSGPRSQD
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Template Sequence  AYLEKIRADKLRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRT
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   757..760.........770.........780.........790.........800.........810......
 
   99100.........110.........120.........130.........140.........150........
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Query Sequence  PSVKRNGVKVPGEHRRKENGVNSPRLDLTLAELQEMASRQQQQIEAQQQMLATKEQRLKF
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Template Sequence  RAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQ. MMLREHKSIIIQKHVR
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   817..820.........830.........840.........850......... 860.........870.....
 
   159160.........170.........180.........190.........200.........210........
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Query Sequence  LKQQDQRQQQQAAEQEKLKRLREIAESQEAKLKKVRALKGHVEQKRLSNGKLVEEIEQMN
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Template Sequence  GWLARVHYHRTLKAIVYLQCCYRRMMAKRELKKLMNNLEITYSTETEKLRSDVERLRMSE
Template Known Secondary structure  TTTTTTTTT

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   876...880.........890.........900.........910.........920.........930.....
 
   219220.........230.........240.........250.........260.........270........
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Query Sequence  SLFQQKQRELVLAVSKVEELTRQLEMLKNGRIDGHHDNQSAVAELDRLYKELQLRNKLNQ
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Template Sequence  EEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNTLLK
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   977..980.........990.........1000.........1010.........1020.........1030......
 
   279280.........290.........300.........310.........320....
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Query Sequence  EQNAKLQQQRECLNKRNSEVAVMDKRVSELRDRLWKKKAALQQKEN
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Template Sequence  TEKEELNRRIHDQAKEITE. . TMEKKLVEETKQLELDLNDERLRYQ
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   1037..1040.........1050..... ....1060.........1070.........1080
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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