Job Description Q8CG79 Confidence 51.44% Date Tue Jul 30 13:24:09 BST 2013 Rank 423 Aligned Residues 317 % Identity 8% Template c1hciB_ PDB info PDB header:triple-helix coiled coil Chain: B: PDB Molecule:alpha-actinin 2; PDBTitle: crystal structure of the rod domain of alpha-actinin Resolution 2.8 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	V	Y	L	S	N	S	E	Q	H	F	T	E	V	P	V	T	P	E	T	I	C	R	D	V	V	D	L	C	K	E	P	G	E	N	D	C	H	L	A	E	V	W	C	G	S	E	R	P	V	A	D	N	E	R	M	F	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	Q	A	E	K	G	Y	E	E	W	L	L	N	E	I	R	R	L	E	R	L	E	H	L	A	E	K	F	R	Q	K	A	S	T	H	E	T	W	A	Y	G	K	E	Q	I	L	L	Q	K	D	Y	E	S	A	S	L	T	E	V
Template Known Secondary structure							T	T																																		T	T									G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																																			.	.	.	.
Query SS confidence																																			.	.	.	.
Query Sequence		L	Q	R	F	G	S	Q	R	N	E	V	R	F	F	L	R	H	E	R	P	P	N	R	D	I	V	S	G	P	R	S	Q	D	.	.	.	.	P	S	V	K	R	N	G	V	K	V	P	G	E	H	R	R	K	E	N	G	V	N	S
Query Conservation																																			.	.	.	.
Alig confidence																																			.	.	.	.
Template Conservation
Template Sequence		R	A	L	L	R	K	H	E	A	F	E	S	D	L	A	A	H	Q	D	R	V	E	Q	I	A	A	I	A	Q	E	L	N	E	L	D	Y	H	D	A	V	N	V	N	D	R	C	Q	K	I	C	D	Q	W	D	R	L	G	T	L	T
Template Known Secondary structure																																			T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.														.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	R	L	D	L	T	L	A	E	L	Q	E	M	A	S	R	Q	Q	Q	Q	I	E	A	Q	Q	Q	M	L	A	T	K	E	Q	R	L	K	F	L	K	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Q	R	Q	Q	Q
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	K	R	R	E	A	L	E	R	M	E	K	L	L	E	T	I	D	Q	L	H	L	E	F	A	K	R	A	A	P	F	N	N	W	M	E	G	A	M	E	D	L	Q	D	M	F	I	V	H	S	I	E	E	I	Q	S	L	I	T	A
Template Known Secondary structure																																											T	T						S	S
Template Predicted Secondary structure
Template SS confidence
		498	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.																							.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	A	E	Q	E	K	L	K	R	L	R	E	I	A	E	S	Q	E	A	K	L	K	K	V	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	G	H	V	E	Q	K	R	L	S
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	E	Q	F	K	A	T	L	P	E	A	D	G	E	R	Q	S	I	M	A	I	Q	N	E	V	E	K	V	I	Q	S	Y	N	I	R	I	S	S	S	N	P	Y	S	T	V	T	M	D	E	L	R	T	K	W	D	K	V	K	Q	L
Template Known Secondary structure																																T	T	T			S		S			T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		558	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	K	L	V	E	E	I	E	Q	M	N	S	L	F	Q	Q	K	Q	R	E	L	V	L	A	V	S	K	V	E	E	L	T	R	Q	L	E	M	L	K	N	G	R	I	D	G	H	H	D	N	Q	S	A	V	A	E	L	D	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	P	I	R	D	Q	S	L	Q	E	E	L	A	R	Q	H	A	N	E	R	L	R	R	Q	F	A	A	Q	A	N	A	I	G	P	W	I	Q	N	K	M	E	E	I	A	R	S	S	I	Q	I	T	G	A	L	E	D	Q	M	N	Q
Template Known Secondary structure																																														S		S		T	T	T	T	S	T
Template Predicted Secondary structure
Template SS confidence
		618	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.									.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.
Query Sequence		Y	K	E	L	Q	L	R	N	K	L	N	Q	E	Q	N	A	K	L	Q	Q	Q	R	E	C	L	N	K	R	N	.	.	.	.	.	.	.	.	S	E	V	A	V	M	D	K	R	V	S	E	L	R	D	R	L	W	K	K	K	A	A
Query Conservation																															.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	Q	Y	E	H	N	I	I	N	Y	K	N	N	I	D	K	L	E	G	D	H	Q	L	I	Q	E	A	L	V	F	D	N	K	H	T	N	Y	T	M	E	H	I	R	V	G	W	E	L	L	L	T	T	I	A	R	T	I	N	E
Template Known Secondary structure																													T	T					T	T		S
Template Predicted Secondary structure
Template SS confidence
		678	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.
		319	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	Q	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	T	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		738	.	740	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D