Job Description Q6TXD4 Confidence 99.94% Date Tue Jul 30 13:06:16 BST 2013 Rank 33 Aligned Residues 188 % Identity 22% Template c4h6yA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ferm, rhogef and pleckstrin domain-containing protein 1; PDBTitle: crystal strucure of the dh-ph-ph domain of farp1 Resolution 4.09 Å

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		781	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.		.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		L	E	K	R	A	K	V	V	A	E	L	L	Q	T	E	R	D	Y	I	R	D	L	E	M	C	I	E	R	V	M	V	P	L	Q	Q	A	Q	.	V	P	N	V	D	F	E	G	L	F	G	N	M	Q	T	V	I	K	V	S	K	Q
Query Conservation																																							.
Alig confidence																																							.
Template Conservation
Template Sequence		M	D	K	A	Y	F	I	A	K	E	V	S	T	T	E	R	T	Y	L	K	D	L	E	V	I	T	S	W	F	Q	S	T	V	S	K	E	D	A	M	P	E	A	L	K	S	L	I	F	P	N	F	E	P	L	H	K	F	H	T	N
Template Known Secondary structure			S																																	T	T	T		S									S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
		840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.		.	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		L	L	A	A	L	E	I	S	D	A	V	G	M	S	S	C	D	C	L	V	P	G	P	V	F	L	D	H	R	D	E	L	E	G	T	Y	R	V	Y	C	Q	N	H	D	E	A	I	S	L	L	E	M	.	Y	E	K	D	E	K	T
Query Conservation																																																						.
Alig confidence														.	.	.	.	.	.	.	.														.																			.
Template Conservation														.	.	.	.	.	.	.	.														.
Template Sequence		F	L	K	E	I	E	Q	R	L	A	L	W	.	.	.	.	.	.	.	.	E	G	D	V	M	L	K	N	I	Q	G	M	K	.	H	L	A	A	H	L	W	K	H	S	E	A	L	E	A	L	E	N	G	I	K	S	S	R	R	L
Template Known Secondary structure														.	.	.	.	.	.	.	.												G	G	.	G	S					T	T											T	T	T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.														.
Template SS confidence
		598	.	600	.	.	.	.	.	.	.	.	.									610	.	.	.	.	.	.	.	.	.	620	.	.		.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.
		899	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	H	L	Q	D	Y	L	A	D	L	K	G	C	T	N	Y	I	N	L	G	S	F	L	I	K	P	V	Q	R	I	M	R	Y	P	L	L	L	M	E	L	L	N	S	T	P	E	S	H	P	D	K	V	P	L	T	N	A	V	L
Query Conservation
Alig confidence									.	.							.																																					.	.	.	.	.	.
Template Conservation									.	.							.																																					.	.	.	.	.	.
Template Sequence		E	N	F	C	R	D	F	.	.	E	L	Q	K	V	C	.	Y	L	P	L	N	T	F	L	L	R	P	L	H	R	L	M	H	Y	K	Q	V	L	E	R	L	C	K	H	H	P	R	D	C	R	A	A	.	.	.	.	.	.	L	A
Template Known Secondary structure									.	.		T	S	S	S		.		S		G	G	G	G	G	T																												.	.	.	.	.	.
Template Predicted Secondary structure									.	.							.																																					.	.	.	.	.	.
Template SS confidence
		662	.	.	.	.	.	.			.	670	.	.	.	.		.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710							.	.
		959	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	K	E	I	N	V	N	I	N	E	Y	K	R	R	K	D	L	V	L	K	Y	R	K	G	D	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	T	E	M	V	A	Q	L	H	G	T	M	I	K	M	E	N	F	Q	K	L	H	E	L	K	K	D
Template Known Secondary structure										T	T	T													T	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		719	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D