Job Description Q6TXD4 Confidence 97.49% Date Tue Jul 30 13:06:16 BST 2013 Rank 276 Aligned Residues 172 % Identity 15% Template c4fzsB_ PDB info PDB header:protein transport Chain: B: PDB Molecule:sorting nexin-1; PDBTitle: structure of human snx1 bar domain Resolution 2.80 Å

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		1026	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	E	T	E	K	N	F	R	M	Q	E	R	L	I	K	S	F	I	R	D	L	S	L	Y	L	Q	H	I	R	E	S	A	C	V	K	V	V	A	A	M	S	I	W	D	L	C	M	E	R	G	H	H	D	L	E	Q	F	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	E	E	K	L	Q	E	V	E	C	E	E	Q	R	L	R	K	L	H	A	V	V	E	T	L	V	N	H	R	K	E	L	A	L	N	T	A	Q	F	A	K	S	L	A	M	L	G	S	S	E	D	N	T	A	L	S	R	A	L	S
Template Known Secondary structure																																																		T
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		1086	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	R	Y	I	S	D	Q	L	F	T	R	F	K	E	R	T	E	R	L	V	I	N	P	L	N	Q	L	L	N	M	F	T	G	P	Y	K	L	V	Q	K	R	F	D	K	L	L	D	F	Y	N	C	T	E	R	A	E	K	L	K
Query Conservation
Alig confidence																		.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		Q	L	A	E	V	E	E	K	I	E	Q	L	D	F	F	L	.	.	.	.	L	A	E	L	L	S	D	Y	I	R	L	L	A	I	V	R	A	A	F	D	Q	R	M	K	T	W	Q	R	W	Q	D	A	Q	A	T	L	Q	K	K	R
Template Known Secondary structure																		.	.	.	.
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.					.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
		1146	.															.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	L	E	E	L	Q	S	A	R	N	N	Y	E	A	L	N	S	Q	L	L	D	E	L	P	K	F	Q	Q	Y	A	Q	S	L	F	T	N	C	I	H	G	Y	A	E
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.
Template Sequence		E	A	E	A	P	D	K	L	Q	Q	A	K	D	E	I	L	E	W	E	S	R	V	T	Q	Y	E	R	D	F	E	R	I	S	T	V	V	R	K	E	S	K	D	F	K	N	.	.	.	.	.	.	.	.	H	V	I	K	Y	L	E
Template Known Secondary structure			T	T																																						T	T				.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.
Template SS confidence
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.									.	.	.	480	.	.	.
		1192	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	C	D	F	V	Q	Q	A	L	E	Q	L	Q	P	L	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	L	Y	S	Q	Q	Q	L	A	K	Y	W	E	A	F	L	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D