Job Description Q6TXD4 Confidence 99.80% Date Tue Jul 30 13:06:16 BST 2013 Rank 46 Aligned Residues 207 % Identity 23% Template c4avmA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:bridging integrator 2; PDBTitle: crystal structure of the n-bar domain of human bridging2 integrator 2. Resolution 1.91 Å Model Dimensions (Å) X:96.818 Y:54.008 Z:33.456

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		999	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	I	K	K	S	S	R	V	S	S	H	L	K	H	L	T	G	F	A	P	Q	L	K	D	E	V	F	E	E	T	E	K	N	F	R	M	Q	E	R	L	I	K	S	F	I	R	D	L	S	L	Y	L	Q	H	I	R	E	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	V	Q	K	K	F	S	R	A	Q	E	K	V	L	Q	K	L	G	K	A	V	E	T	K	D	E	R	F	E	Q	S	A	S	N	F	Y	Q	Q	Q	A	E	G	H	K	L	Y	K	D	L	K	N	F	L	S	A	V	K	V	M	H
Template Known Secondary structure																		T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		1059	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	V	K	V	V	A	A	M	S	I	W	D	L	C	M	E	R	G	H	H	D	L	E	Q	F	E	K	V	H	R	Y	I	S	D	Q	L	F	T	R	F	K	E	R	T	E	R	L	V	I	N	P	L	N	Q	L	L	N	M	F	T
Query Conservation
Alig confidence																										.	.
Template Conservation																										.	.
Template Sequence		E	S	S	K	R	V	S	E	T	L	Q	E	I	Y	S	S	E	W	D	G	H	E	E	L	.	.	K	A	I	V	W	N	N	D	L	L	W	E	D	Y	E	E	K	L	A	D	Q	A	V	R	T	M	E	I	Y	V	A	Q	F	S
Template Known Secondary structure															S		T	T	S	T	T					.	.																						T										T
Template Predicted Secondary structure																										.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		1119	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.										.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.
Query Sequence		G	P	Y	K	L	V	Q	K	R	F	D	K	L	L	D	F	Y	N	C	T	E	R	A	E	K	L	K	D	K	.	.	.	.	.	.	.	.	.	K	T	L	E	E	L	Q	S	A	R	N	N	Y	E	A	L	N	S	Q	L	L	D
Query Conservation																															.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	I	K	E	R	I	A	K	R	G	R	K	L	V	D	Y	D	S	A	R	H	H	L	E	A	V	Q	N	A	K	K	K	D	E	A	K	T	A	K	A	E	E	E	F	N	K	A	Q	T	V	F	E	D	L	N	Q	E	L	L	E
Template Known Secondary structure																													T		S	S
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	P	K	F	Q	Q	Y	A	Q	S	L	F	T	N	C	I	H	G	Y	A	E	A	H	C	D	F	V	Q	Q	A	L	E	Q	L	Q	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	P	I	L	Y	N	S	R	I	G	C	Y	V	T	I	F	Q	N	I	S	N	L	R	D	V	F	Y	R	E	M	S	K	L	N	H	N	L
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D