Job Description Q6TXD4 Confidence 99.94% Date Tue Jul 30 13:06:16 BST 2013 Rank 35 Aligned Residues 194 % Identity 14% Template c3mpxA_ PDB info PDB header:lipid binding protein Chain: A: PDB Molecule:fyve, rhogef and ph domain-containing protein 5; PDBTitle: crystal structure of the dh and ph-1 domains of human fgd5 Resolution 2.80 Å

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		781	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.									.	.	820	.	.	.	.	.	.	.	.	.	830	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.
Query Sequence		L	E	K	R	A	K	V	V	A	E	L	L	Q	T	E	R	D	Y	I	R	D	L	E	M	C	I	E	R	V	M	V	P	L	Q	Q	A	Q	.	.	.	.	.	.	.	.	V	P	N	V	D	F	E	G	L	F	G	N	M	Q	T
Query Conservation																																							.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	S	R	A	L	V	I	A	Q	E	L	L	S	S	E	K	A	Y	V	E	X	L	Q	H	L	N	L	D	F	H	G	A	V	X	R	A	L	D	D	X	D	H	E	D	T	L	A	R	E	E	L	R	Q	G	L	S	E	L	P	A
Template Known Secondary structure																														T												T	T
Template Predicted Secondary structure
Template SS confidence
		890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.
		833	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	K	V	S	K	Q	L	L	A	A	L	E	I	S	D	A	V	G	M	S	S	C	D	C	L	V	P	G	P	V	F	L	D	H	R	D	E	L	E	G	T	Y	R	V	Y	C	Q	N	H	D	E	A	I	S	L	L	E	M	Y
Query Conservation
Alig confidence																				.	.	.																				.
Template Conservation																				.	.	.																				.
Template Sequence		I	H	D	L	H	Q	G	I	L	E	E	L	E	E	R	L	S	N	.	.	.	W	E	S	Q	Q	K	V	A	D	V	F	L	A	R	E	Q	G	F	D	.	H	H	A	T	H	I	L	Q	F	D	R	Y	L	G	L	L	S	E	N
Template Known Secondary structure																			T	.	.	.	T	T	T					T					T	T	T	T	T			.
Template Predicted Secondary structure																				.	.	.																				.
Template SS confidence
		952	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.				970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.		.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.
		893	.		.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		E	K	.	D	E	K	T	Q	K	H	L	Q	D	Y	L	A	D	L	K	G	C	T	N	Y	I	N	L	G	S	F	L	I	K	P	V	Q	R	I	M	R	Y	P	L	L	L	M	E	L	L	N	S	T	P	E	S	H	P	D	K	V
Query Conservation				.
Alig confidence				.													.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.
Template Sequence		C	L	H	S	P	R	L	A	A	A	V	R	E	F	E	.	.	.	.	.	.	.	.	Q	S	T	A	K	H	R	L	L	R	V	V	Q	R	L	F	Q	Y	Q	V	L	L	T	D	Y	L	N	N	L	C	P	D	S	A	E	Y	D
Template Known Secondary structure			T	T													.	.	.	.	.	.	.	.	T																										T	T	S		T	T	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.
Template SS confidence
		1008	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.									.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.
		952	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	T	N	A	V	L	A	V	K	E	I	N	V	N	I	N	E	Y	K	R	R	K	D	L	V	L	K	Y	R	K	G	D	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	T	Q	G	A	L	S	L	I	S	K	V	T	D	R	A	N	D	S	X	E	Q	G	E	N	L	Q	K	L	V	H	I	E	H	S
Template Known Secondary structure																						T	T
Template Predicted Secondary structure
Template SS confidence
		1066	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D