Return to main results Retrieve Phyre Job Id

Job DescriptionQ6TXD4
Confidence95.32%DateTue Jul 30 13:06:16 BST 2013
Rank284Aligned Residues112
% Identity13%Templatec3h41A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:nlp/p60 family protein; PDBTitle: crystal structure of a nlpc/p60 family protein (bce_2878) from2 bacillus cereus atcc 10987 at 1.79 a resolution
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30.........40..... ....50.........60.........70...
Predicted Secondary structure 








.........
















Query SS confidence 






















. . . . . . . . .



























Query Sequence  LFVGDVIEVLAVVDEFWLLGKKE. . . . . . . . . DVTGQFPSSFVEIVTIPSLKEGERLFVC
Query Conservation 
  

 
 

      
  
   .........   
 

   
                 
Alig confidence 











.









.........



























Template Conservation 

 

 
 

  . 


  
 
  
 
    


 


    
               

Template Sequence  ALLGQEVTVVDK. KGDWVKVLVHGQPTPRNEEGYPGWXPEKQLTYNQEFADKTNEPFVLV
Template Known Secondary structure  TT
.TTTT

BTTBSS
GGG

TTTS
Template Predicted Secondary structure 



.



































Template SS confidence 



























































   86...90....... ..100.........110.........120.........130.........140....
 
   74.....80...... ...90.........100.........110.........120.......
Predicted Secondary structure 












......




























Query SS confidence 












. . . . . .








































Query Sequence  ICEFVSRELNSLS. . . . . . LHRGDLVILDDSAPTAGWLQGRSCWGAWGFFPSSCVQELCL
Query Conservation             
 ......   

            
  
       
  
         
Alig confidence 












......











..


























Template Conservation 
     
            

 

 



 
..      
  
 
  
 
          
Template Sequence  TKPTAILYINPSEKHKSLEVSYNTRLPLLSE. . DTISYRVLLPNGQKAWLRKNDGTFYRS
Template Known Secondary structure 
SSSS
TT

TT
..
SS
TTS
GGGS
Template Predicted Secondary structure 

















..




















Template SS confidence 



























































   145....150.........160.........170..... ....180.........190.........200..
 
   128.130.......
Predicted Secondary structure 






Query SS confidence 









Query Sequence  SSRSRRWHAQ
Query Conservation            
Alig confidence 









Template Conservation            
Template Sequence  QNDIPTPAAD
Template Known Secondary structure  GGGS



Template Predicted Secondary structure 







Template SS confidence 









   203......210..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D