 |
| Job Description | Q6TXD4 | | Confidence | 42.07% | Date | Tue Jul 30 13:06:16 BST 2013 |
| Rank | 329 | Aligned Residues | 29 |
| % Identity | 21% | Template | c3bbnQ_ |
| PDB info |
PDB header:ribosome | Chain: Q: PDB Molecule:ribosomal protein s17; |
PDBTitle: homology model for the spinach chloroplast 30s subunit fitted to 9.4a2 cryo-em map of the 70s chlororibosome.
|
| Resolution | 9.40 Å |
|
|   |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . |
| Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
G | S | M | V | R | A | I | F | D | F | C | P | S | V | S | E | E | L | P | L | F | V | G | D | V | I | E | V | L | A |
| Query Conservation |   |
  |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |
|
|   |
|   |   |
|
|   |
|   |
|
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |   |   |
|   |
|
|
|   |
|
|
|   |   |   | . |   |   |   |   |
|
|   |
|   |
|   |
|
| Template Sequence |   |
K | R | R | V | R | M | K | K | K | Y | Q | A | H | D | P | D | N | . |
Q | F | K | V | G | D | V | V | R | L | E | K |
| Template Known Secondary structure |   |
| S |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
| . |
|
|
| T | T |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
| . |
|
|
|
|
|
|  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | |
. | . | . | 110 | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|