Job Description Q6TXD4 Confidence 99.95% Date Tue Jul 30 13:06:16 BST 2013 Rank 20 Aligned Residues 189 % Identity 27% Template c2z0qA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:rho guanine nucleotide exchange factor 3; PDBTitle: crystal structure of dh-ph domain of rhogef3(xpln) Resolution 1.79 Å Model Dimensions (Å) X:50.114 Y:67.530 Z:39.089

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		775	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.		.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		N	P	E	Q	R	M	L	E	K	R	A	K	V	V	A	E	L	L	Q	T	E	R	D	Y	I	R	D	L	E	M	C	I	E	R	V	M	V	P	L	Q	Q	A	Q	.	V	P	N	V	D	F	E	G	L	F	G	N	M	Q	T	V
Query Conservation																																													.
Alig confidence																																													.
Template Conservation
Template Sequence		Q	V	L	T	A	K	E	I	K	R	Q	E	A	I	F	E	L	S	Q	G	E	E	D	L	I	E	D	L	K	L	A	K	K	A	Y	H	D	P	X	L	K	L	S	I	X	T	E	Q	E	L	N	Q	I	F	G	T	L	D	S	L
Template Known Secondary structure																																				T							T	T	S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		834	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	V	S	K	Q	L	L	A	A	L	E	I	S	D	A	V	G	M	S	S	C	D	C	L	V	P	G	P	V	F	L	D	H	R	D	E	L	E	G	T	Y	R	V	Y	C	Q	N	H	D	E	A	I	S	L	L	E	M	Y	E
Query Conservation
Alig confidence																									.	.	.														.
Template Conservation																									.	.	.														.
Template Sequence		I	P	L	H	E	E	L	L	S	Q	L	R	D	V	R	K	P	D	G	S	T	E	H	.	.	.	V	G	P	I	L	V	G	W	L	P	C	L	S	.	S	Y	D	S	Y	C	S	N	Q	V	A	A	K	A	L	L	D	H	K	K
Template Known Secondary structure																		T	T	S			S		.	.	.									G	G	G	G	G	.																				T
Template Predicted Secondary structure																									.	.	.														.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.				.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		894	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	E	K	T	Q	K	H	L	Q	D	Y	L	A	D	L	K	G	C	T	N	Y	I	N	L	G	S	F	L	I	K	P	V	Q	R	I	M	R	Y	P	L	L	L	M	E	L	L	N	S	T	P	E	S	H	P	D	K	V	P	L
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	H	R	V	Q	D	F	D	L	W	N	F	L	D	I	P	R	S	R	L	V	K	Y	P	L	L	L	R	E	I	L	R	H	T	P	N	D	N	P	D	Q	Q	H	L
Template Known Secondary structure		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	T	G	G	G																			T	S		T	T	S	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		120																.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		954	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	A	V	L	A	V	K	E	I	N	V	N	I	N	E	Y	K	R	R	K	D	L	V	L	K	Y	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	A	I	N	I	I	Q	G	I	V	A	E	I	N	T	K	T	G	E	S	E	C	R	Y	Y	K	E	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D