Return to main results Retrieve Phyre Job Id

Job DescriptionQ6TXD4
Confidence99.65%DateTue Jul 30 13:06:16 BST 2013
Rank51Aligned Residues115
% Identity17%Templatec2rqrA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:engulfment and cell motility protein 1, linker, dedicator PDBTitle: the solution structure of human dock2 sh3 domain - elmo1 peptide2 chimera complex
ResolutionUNK
Model Dimensions (Å)X:49.273 Y:47.637 Z:45.456

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1461........1470.........1480.........1490.........1500.........1510.........1520
Predicted Secondary structure 
























































Query SS confidence 



























































Query Sequence  PASTLRGCQRSSPHSEVVGYSVPGRNDQGSDSIKGSARVCQAPEDRDRGVGSSETEGNQV
Query Conservation                                                              
Alig confidence 



























































Template Conservation 
 

            
  

      
                                
Template Sequence  SSGSSGRLLDLENIQIPDAPPPIPKEPSNYDFSGPSSGIEGRGSSGSSGSSGSSGDKERH
Template Known Secondary structure 








SS





SS







SS



SS


TTTT








S
S



Template Predicted Secondary structure 

























































Template SS confidence 



























































   2.......10.........20.........30.........40.........50.........60.
 
   1521........1530.........1540.........1550.........1560.. .......1570.......
Predicted Secondary structure 


























...






Query SS confidence 









































. . .














Query Sequence  YFAIYTFKARNPNELSVLANQRLRIHEFKDVTGNTEWWLAEV. . . NGRKGYVPSNYIRKT
Query Conservation    
 


 
    


   

 
 
    
      

 

 ... 
  
 

 


   
Alig confidence 





























.....






...














Template Conservation    




 
    



  

 
 
 
   .....  
        
  
 

 


   
Template Sequence  GVAIYNFQGSGAPQLSLQIGDVVRIQETCG. . . . . DWYRGYLIKHKMLQGIFPKSFIHIK
Template Known Secondary structure  B
S
B


STTB

B
TT
T.....TSS
TT
GGGB


Template Predicted Secondary structure 











.....











Template SS confidence 



























































   62.......70.........80.........90. ........100.........110......
 
   1578.1580
Predicted Secondary structure 


Query SS confidence 


Query Sequence  EYT
Query Conservation     
Alig confidence 


Template Conservation 
  
Template Sequence  EVT
Template Known Secondary structure 


Template Predicted Secondary structure 

Template SS confidence 


   117..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D