Job Description Q6TXD4 Confidence 99.94% Date Tue Jul 30 13:06:16 BST 2013 Rank 31 Aligned Residues 189 % Identity 27% Template c2rgnB_ PDB info PDB header:signaling protein complex Chain: B: PDB Molecule:rhoa/rac/cdc42 exchange factor; PDBTitle: crystal structure of p63rhogef complex with galpha-q and rhoa Resolution 3.50 Å

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		772	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.				.	.	820	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.
Query SS confidence																																																.	.	.
Query Sequence		S	T	E	N	P	E	Q	R	M	L	E	K	R	A	K	V	V	A	E	L	L	Q	T	E	R	D	Y	I	R	D	L	E	M	C	I	E	R	V	M	V	P	L	Q	Q	A	Q	.	.	.	V	P	N	V	D	F	E	G	L	F	G
Query Conservation																																																.	.	.
Alig confidence																																																.	.	.
Template Conservation
Template Sequence		S	E	E	E	Q	K	K	K	A	L	E	R	S	M	Y	V	L	S	E	L	V	E	T	E	K	M	Y	V	D	D	L	G	Q	I	V	E	G	Y	M	A	T	M	A	A	Q	G	V	P	E	S	L	R	G	R	D	R	I	V	F	G
Template Known Secondary structure								S																													T	T												S	S	S	G	G	G						T
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		829	830	.	.	.	.	.	.	.	.	.		840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		N	M	Q	T	V	I	K	V	S	K	Q	.	L	L	A	A	L	E	I	S	D	A	V	G	M	S	S	C	D	C	L	V	P	G	P	V	F	L	D	H	R	D	E	L	E	G	T	Y	R	V	Y	C	Q	N	H	D	E	A	I	S
Query Conservation													.
Alig confidence													.									.	.	.	.	.	.																				.
Template Conservation																						.	.	.	.	.	.																				.
Template Sequence		N	I	Q	Q	I	Y	E	W	H	R	D	Y	F	L	Q	E	L	Q	R	C	.	.	.	.	.	.	L	K	D	P	D	W	L	A	Q	L	F	I	K	H	E	R	R	L	H	.	M	Y	V	V	Y	C	Q	N	K	P	K	S	E	H
Template Known Secondary structure		T											T									.	.	.	.	.	.		S		G	G	G								T	T	T	T	T		.								T	S
Template Predicted Secondary structure																						.	.	.	.	.	.																				.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.							.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.
		888	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	E	M	Y	E	K	D	E	K	T	Q	K	H	L	Q	D	Y	L	A	D	L	K	G	C	T	N	Y	I	N	L	G	S	F	L	I	K	P	V	Q	R	I	M	R	Y	P	L	L	L	M	E	L	L	N	S	T	P	E	S	H
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.
Template Sequence		V	V	S	E	F	G	D	.	.	.	.	.	.	.	.	S	Y	F	E	E	L	R	Q	Q	L	G	H	R	L	Q	L	N	D	L	L	I	K	P	V	Q	R	I	M	K	Y	Q	L	L	L	K	D	F	L	K	Y	Y	N	R	A	G
Template Known Secondary structure				T	T	T	S		.	.	.	.	.	.	.	.													S	S						T	T							T	S												T	S	S	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.
Template SS confidence
		262	.	.	.	.	.	.									.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		948	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	K	V	P	L	T	N	A	V	L	A	V	K	E	I	N	V	N	I	N	E	Y	K	R	R	K	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	D	T	A	D	L	E	Q	A	V	E	V	M	C	F	V	P	K	R	C	N	D	M	M	T	L	G	R
Template Known Secondary structure		S																									G	G	G
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D