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Job DescriptionQ6TXD4
Confidence98.84%DateTue Jul 30 13:06:16 BST 2013
Rank262Aligned Residues202
% Identity14%Templatec2d1lA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:metastasis suppressor protein 1; PDBTitle: structure of f-actin binding domain imd of mim (missing in metastasis)
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1023......1030.........1040.........1050.........1060.........1070... .
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Query Sequence  DEVFEETEKNFRMQERLIKSFIRDLSLYLQHIRESACVKVVAAMSIWDLCM. . . . . . . . E
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Template Sequence  GGLFQTIISDXKGSYPVWEDFINKAGKLQSQLRTTVVAAAAFLDAFQKVADXATNTRGGT
Template Known Secondary structure  T
TSST
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   13......20.........30.........40.........50.........60.........70..
 
   1075....1080.........1090.........1100.........1110.........1120.........1130....
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Query Sequence  RGHHDLEQFEKVHRYISDQLFTRFKERTERLVINPLNQLLNMFTGPYKLVQKRFDKLLDF
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Template Sequence  REIGSALTRXCXRHRSIEAKLRQFSSALIDCLINPLQEQXEEWKKVANQLDKDHAK. . EY
Template Known Secondary structure  T..
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   73......80.........90.........100.........110.........120........ .130
 
   1135....1140....... ..1150.........1160.........1170
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Query Sequence  YNCTERAEKLKDK. . . . . . . . . . . . . . . . . . . . . . . . KTLEELQSARNNYEALNSQLLDE
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Template Sequence  KKARQEIKKKSSDTLKLQKKAKKVDAQGRGDIQPQLDSALQDVNDKYLLLEETEKQAVRK
Template Known Secondary structure  SS
GGGTTTTS
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   131........140.........150.........160.........170.........180.........190
 
   1171........1180.........1190.........1200.........1210.........1220.......
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Query Sequence  LPKFQQYAQSLFTNCIHGYAEAHCDFVQQALEQLQPLLSLLKATDREGNLIAIFLEE
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Template Sequence  ALIEERGRFCTFISXLRPVIEEEISXLGEI. THLQTISEDLKSLTXDPHKLPSSSEQ
Template Known Secondary structure  GGGGG.TS
TTS

GGG

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   191........200.........210.........220 .........230.........240......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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