Job Description Q6TXD4 Confidence 80.84% Date Tue Jul 30 13:06:16 BST 2013 Rank 296 Aligned Residues 109 % Identity 15% Template c1m9sA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:internalin b; PDBTitle: crystal structure of internalin b (inlb), a listeria2 monocytogenes virulence protein containing sh3-like3 domains. Resolution 2.65 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.															.																						.
Query SS confidence																						.	.	.															.																						.
Query Sequence		P	S	V	S	E	E	L	P	L	F	V	G	D	V	I	E	V	L	A	V	.	.	.	V	D	E	F	W	L	L	G	K	K	E	D	V	T	.	G	Q	F	P	S	S	F	V	E	I	V	T	I	P	S	L	K	E	G	E	R	.
Query Conservation																						.	.	.															.																						.
Alig confidence																						.	.	.															.																						.
Template Conservation
Template Sequence		A	K	H	V	N	K	L	S	V	Y	Q	G	K	N	M	R	I	L	R	E	A	K	T	P	I	T	T	W	Y	Q	F	S	I	G	G	K	V	I	G	W	V	D	T	R	A	L	N	T	F	Y	K	Q	S	M	E	K	P	T	R	L
Template Known Secondary structure								G	G	G	G		S	S											S	S									T	T								T	T	T							G	G	G
Template Predicted Secondary structure
Template SS confidence
		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
														70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																			.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																																			.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	L	F	V	C	I	C	E	F	V	S	R	E	L	N	S	L	S	L	H	R	G	D	L	V	I	L	D	D	S	A	P	T	A	G	.	.	W	L	Q	G	R	S	C	W	G	A	W	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																			.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																			.	.
Template Conservation
Template Sequence		T	R	Y	V	S	A	N	K	A	G	E	S	Y	Y	K	V	P	V	A	D	N	P	V	K	R	G	T	L	A	K	Y	K	N	Q	K	L	I	V	D	C	Q	A	T	I	E	G	Q	L	W	Y	R	I	R	T	S	S	T	F	I	G
Template Known Secondary structure							T	T	T	T	T	S				S	S	S	S			G	G	G					G	G	G	S	T	T												T	T									S	S	S
Template Predicted Secondary structure
Template SS confidence
		560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.
		116	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	P	S	S	C	V	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	T	K	A	A	N	L	R
Template Known Secondary structure					G	G	G
Template Predicted Secondary structure
Template SS confidence
		620	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D