Job Description Q6TXD4 Confidence 99.94% Date Tue Jul 30 13:06:16 BST 2013 Rank 29 Aligned Residues 187 % Identity 27% Template c1lb1C_ PDB info PDB header:signaling protein Chain: C: PDB Molecule:guanine nucleotide exchange factor dbs; PDBTitle: crystal structure of the dbl and pleckstrin homology2 domains of dbs in complex with rhoa Resolution 2.81 Å

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		775	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820								.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.
Query Sequence		N	P	E	Q	R	M	L	E	K	R	A	K	V	V	A	E	L	L	Q	T	E	R	D	Y	I	R	D	L	E	M	C	I	E	R	V	M	V	P	L	Q	Q	A	Q	V	P	N	.	.	.	.	.	.	.	V	D	F	E	G	L	F
Query Conservation																																																.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	E	E	E	S	L	A	I	L	R	R	H	V	M	N	E	L	L	D	T	E	R	A	Y	V	E	E	L	L	C	V	L	E	G	Y	A	A	E	M	D	N	P	L	M	A	H	L	I	S	T	G	L	Q	N	K	K	N	I	L	F
Template Known Secondary structure																																				T	T	G	G	G	G		G	G	G	G	G	G	S							T
Template Predicted Secondary structure
Template SS confidence
		624	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.
		828	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	M	Q	T	V	I	K	V	S	K	Q	L	L	A	A	L	E	I	S	D	A	V	G	M	S	S	C	D	C	L	V	P	G	P	V	F	L	D	H	R	D	E	L	E	G	T	Y	R	V	Y	C	Q	N	H	D	E	A	I	S
Query Conservation
Alig confidence																						.	.	.	.	.																					.
Template Conservation																						.	.	.	.	.																					.
Template Sequence		G	N	M	E	E	I	Y	H	F	H	N	R	I	F	L	R	E	L	E	S	.	.	.	.	.	C	I	D	C	P	E	L	V	G	R	C	F	L	E	R	M	E	E	F	Q	.	I	Y	E	K	Y	C	Q	N	K	P	R	S	E	S
Template Known Secondary structure		T	T											T							T	.	.	.	.	.	T	S	S		G	G	G							T	T	T	T	G	G	G	.
Template Predicted Secondary structure																						.	.	.	.	.																					.
Template SS confidence
		684	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.						.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.		.	.	.	.	.	.	730	.	.	.	.	.	.	.
		888	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	E	M	Y	E	K	D	E	K	T	Q	K	H	L	Q	D	Y	L	A	D	L	K	G	C	T	N	Y	I	N	L	G	S	F	L	I	K	P	V	Q	R	I	M	R	Y	P	L	L	L	M	E	L	L	N	S	T	P	E	S	H
Query Conservation
Alig confidence																					.	.	.	.	.	.	.																																.
Template Conservation																					.	.	.	.	.	.	.																																.
Template Sequence		L	W	R	Q	C	S	D	C	P	F	F	Q	E	C	Q	K	K	L	D	.	.	.	.	.	.	.	H	K	L	S	L	D	S	Y	L	L	K	P	V	Q	R	I	T	K	Y	Q	L	L	L	K	E	M	L	K	Y	S	K	.	H	C
Template Known Secondary structure							T	T	S											T	.	.	.	.	.	.	.		S	S							T							T	T											T		T	.	T	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.																																.
Template SS confidence
		738	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.								.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.		.	.
		948	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	K	V	P	L	T	N	A	V	L	A	V	K	E	I	N	V	N	I	N	E	Y	K	R	R	K	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	A	E	D	L	Q	E	A	L	S	S	I	L	G	I	L	K	A	V	N	D	S	M	H	L	I	A
Template Known Secondary structure		T	T																									T	T
Template Predicted Secondary structure
Template SS confidence
		790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D