Return to main results Retrieve Phyre Job Id

Job DescriptionQ6TXD4
Confidence99.61%DateTue Jul 30 13:06:16 BST 2013
Rank54Aligned Residues72
% Identity17%Templatec1bb9A_
PDB info PDB header:transferaseChain: A: PDB Molecule:amphiphysin 2; PDBTitle: crystal structure of the sh3 domain from rat amphiphysin 2
Resolution2.20 Å
Model Dimensions (Å)X:30.868 Y:27.324 Z:35.032

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1507..1510.........1520.........1530.........1540.........1550...... ...1560..
Predicted Secondary structure 




































.
...
Query SS confidence 

















































.





. . .
Query Sequence  DRGVGSSETEGNQVYFAIYTFKARNPNELSVLANQRLRIHEFKDVTGNTE. WWLAEV. . .
Query Conservation                  
 


 
    


   

 
 
    
      .

 

 ...
Alig confidence 

















































.





...
Template Conservation 
 
   


     
 


 
      


   

 
 
         



  
     
Template Sequence  TTGRLDLPPGFMFKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESD
Template Known Secondary structure 



SS

TT

SS
B

SSTTB

B
TT


S
GGG

TT
Template Predicted Secondary structure 




































Template SS confidence 



























































   12.......20.........30.........40.........50.........60.........70.
 
   1563......1570........
Predicted Secondary structure  .......







Query SS confidence  . . . . . . .















Query Sequence  . . . . . . . NGRKGYVPSNYIRKTE
Query Conservation  ....... 
  
 

 


    
Alig confidence  .......















Template Conservation          
  
 

 


  
 
Template Sequence  WNQHKELEKCRGVFPENFTERVQ
Template Known Secondary structure  TT


GGG
Template Predicted Secondary structure 













Template SS confidence 






















   72.......80.........90....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D