Job Description Q80TT8 Confidence 94.64% Date Wed Jul 10 14:12:26 BST 2013 Rank 46 Aligned Residues 170 % Identity 15% Template d2hyec2 SCOP info alpha-alpha superhelix Cullin repeat-like Cullin repeat Resolution 3.10

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		641	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	F	R	E	Q	L	C	R	R	T	C	L	F	Y	T	I	R	A	Q	A	W	S	R	D	I	A	E	D	R	Q	R	L	L	Q	L	Y	P	R	L	N	R	V	L	R	H	E	Q	N	F	A	D	R	F	L	P	D	D	E	A
Query Conservation
Alig confidence																									.	.	.	.	.																															.
Template Conservation																									.	.	.	.	.																															.
Template Sequence		D	S	F	E	L	K	F	L	E	E	T	N	C	L	Y	A	A	E	G	Q	R	L	M	.	.	.	.	.	Q	E	R	E	V	P	E	Y	L	N	H	V	S	K	R	L	E	E	E	G	D	R	V	I	T	Y	L	D	H	S	.	T
Template Known Secondary structure				T																					.	.	.	.	.			S																T					T	T	T	S		T	T	.	T
Template Predicted Secondary structure																									.	.	.	.	.																															.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.						.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.		.
		701	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	A	L	G	K	T	C	W	E	A	L	V	S	P	L	V	Q	N	I	T	S	P	D	A	G	G	V	S	S	L	G	W	L	L	D	Q	Y	L	E	H	R	E	S	T	R	S	R	Q	G	P	A	A	S	F	A	S	Q	V	R
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	K	P	L	I	A	C	V	E	K	Q	L	L	G	E	H	L	T	A	I	L	Q	K	G	.	.	.	.	.	.	.	.	.	.	L	D	H	L	L	D	E	N	R	V	P	D	.	.	.	.	.	.	.	.	.	.	.	.	L	A
Template Known Secondary structure														T	T	T		S						T	T	.	.	.	.	.	.	.	.	.	.						T	T	T					.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.											.	.	.	310	.	.	.	.	.	.	.	.													.	320
		761	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	C	H	L	L	V	H	V	E	A	P	P	G	P	S	P	E	P	S	S	Q	P	L	S	K	N	S	K	G	Q	D	G	S	P	T	P	A	P	T	P	V	C	P	S	T	S	L	R	N	L	T	Q	C	W	L	S	V	V	Q
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	M	Y	Q	L	F	S	R	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	Q	Q	A	L	L	Q	H	W	S	E	Y	I	K
Template Known Secondary structure										S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		321	.	.	.	.	.	.	.	.	330																																				.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		821	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	V	S	R	F	L	A	A	A	W	R	A	S	D	F	V	P	R	Y	C	S	L	Y	Q	R	L	Q	S	A	G	S	E	L	F	G	P	R	A	A	F	T	L	A	L	R	S	G	F	S	G	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	F	G	T	A	I	V	I	N	P	E	K	D	K	D	M	V	Q	D	L	L	D	F	K	D	K	V	D	H	V	I	E	V	C	F	Q	K	N	E	R	F	V	N	L	M	K	E	S	F	E	T	F	I
Template Known Secondary structure									S		G	G	G	T	T	T																		T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D