 |
| Job Description | Q80TT8 | | Confidence | 33.39% | Date | Wed Jul 10 14:12:26 BST 2013 |
| Rank | 196 | Aligned Residues | 34 |
| % Identity | 26% | Template | d1z60a1 |
| SCOP info | Cysteine-rich domain
| Cysteine-rich domain
| TFIIH p44 subunit cysteine-rich domain
|
| Resolution | UNK |
|
|   |   |
1568 | . | 1570 | . | . | . | . | . | . | . | . | . | 1580 | . | . | . | . | . | . | . | . | . | 1590 | . | . | . | . | . | . | . | . | . | 1600 | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
A | K | L | I | S | K | R | C | P | S | C | Q | A | P | I | E | K | N | E | G | C | L | H | M | T | C | A | R | C | N | H | G | F | C | W | R | C |
| Query Conservation |   |
|
|
|
|
|
|   |
|
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |
|
|
|
|   |   |   |
|   |   |   |   |   | . | . | . |
|   |
|   |   |
|   |   |   |
|
|   |
|
|
| Template Sequence |   |
E | Y | N | G | E | R | F | C | Y | G | C | Q | G | E | L | K | D | Q | H | V | . |
. |
. |
Y | V | C | A | V | C | Q | N | V | F | C | V | D | C |
| Template Known Secondary structure |   |
 |  |
| S |
|
|  |  | T | T | T | T |  |  |
| T | T | S |  |  | . | . | . |  |
|
| T | T | T | T |
|
| B |
|  |  |  |
| Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
| . | . | . |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
338 | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | |
|
|
. | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|