Job Description Q80TT8 Confidence 41.74% Date Wed Jul 10 14:12:26 BST 2013 Rank 167 Aligned Residues 94 % Identity 14% Template d1xd7a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Transcriptional regulator Rrf2 Resolution 2.30

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		1111	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	T	V	Q	M	W	L	L	F	N	Q	S	E	E	V	S	V	E	T	L	L	R	N	S	D	L	S	P	E	L	L	H	Q	A	L	L	P	L	T	S	D	N	G	P	L	T	L	E	E	T	Q	D	Y	P	Q	G	G	V	L
Query Conservation
Alig confidence																																												.					.	.					.						.
Template Conservation																																												.					.	.					.						.
Template Sequence		A	V	A	I	H	I	L	S	L	I	S	M	D	E	K	T	S	S	E	I	I	A	D	S	V	N	T	N	P	V	V	V	R	R	M	I	S	L	L	K	K	A	.	D	I	L	T	.	.	S	R	A	G	.	V	P	G	A	S	.
Template Known Secondary structure													T		S												T	S															T	.	T	S			.	.			S	S	.	S	S	S			.
Template Predicted Secondary structure																																												.					.	.					.						.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.			.	.	.	.		.	60	.	.	.
		1171	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	R	E	P	R	S	Q	T	H	E	E	F	L	W	L	I	P	P	Q	T	Y	L	S	V	E	K	D	E	G	R	T	L	E	Q	K	R	N	L	L	S	C	L	L	V	R	I	L	K	A
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	K	D	P	A	D	I	S	L	L	E	V	Y	R	A	V	.	.	.	.	.	.	.	.	.	.	.	Q	K	N	P	K	C	P	V	G	K	K	I	Q	N	A	L	D	E	T	F	E	S
Template Known Secondary structure			S	S		G	G	G		B									.	.	.	.	.	.	.	.	.	.	.						S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80												.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D