Job Description Q80TT8 Confidence 58.01% Date Wed Jul 10 14:12:26 BST 2013 Rank 138 Aligned Residues 391 % Identity 13% Template d1v18a1 SCOP info alpha-alpha superhelix ARM repeat Armadillo repeat Resolution 2.1

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	A	V	L	A	T	V	Q	I	S	S	L	D	T	N	L	Q	L	S	G	L	C	A	L	S	Q	A	V	E	E	V	T	E	R	D	H	P	L	V	R	P	D	R	P	L	R	E	K	L	V	K	T	L	V	D	L	L	T	N
Query Conservation
Alig confidence											.	.																																	.	.	.	.	.	.
Template Conservation											.	.																																	.	.	.	.	.	.
Template Sequence		I	P	A	L	V	K	M	L	G	.	.	S	P	V	D	S	V	L	F	Y	A	I	T	T	L	H	N	L	L	L	H	Q	E	G	A	K	M	A	V	R	L	A	G	.	.	.	.	.	.	G	L	Q	K	M	V	A	L	L	N	K
Template Known Secondary structure									T	T	.	.		S																				T	T								T	T	.	.	.	.	.	.								G	G	G
Template Predicted Secondary structure											.	.																																	.	.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.							.	.	280	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	G	E	K	M	V	V	V	M	A	L	R	L	L	Y	L	L	M	T	K	H	E	W	R	P	L	F	A	R	E	G	G	I	Y	A	V	L	I	C	M	Q	E	Y	K	T	S	V	L	V	Q	Q	A	G	L	A	A	L	K	M
Query Conservation
Alig confidence			.	.
Template Conservation			.	.
Template Sequence		T	.	.	N	V	K	F	L	A	I	T	T	D	C	L	Q	I	L	A	Y	G	N	Q	E	S	K	L	I	I	L	A	S	G	G	P	Q	A	L	V	N	I	M	R	T	Y	T	Y	E	K	L	L	W	T	T	S	R	V	L	K	V
Template Known Secondary structure			.	.																	T	T											T	T
Template Predicted Secondary structure			.	.
Template SS confidence
		289			290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		138	.	140	.	.	.	.	.					.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence		L	A	I	A	N	S	S	D	.	.	.	.	V	P	T	F	I	P	S	R	D	S	I	Q	P	L	F	D	T	Q	M	T	R	E	I	F	A	S	I	D	S	A	T	R	P	G	S	E	S	L	L	L	S	V	P	A	A	V	V	L
Query Conservation										.	.	.	.
Alig confidence										.	.	.	.
Template Conservation
Template Sequence		L	S	V	C	S	S	N	K	P	A	I	V	E	A	G	G	M	Q	A	L	G	L	H	L	T	D	P	S	Q	R	L	V	Q	N	C	L	W	T	L	R	N	L	S	D	A	A	T	K	Q	E	G	M	E	G	L	L	G	T	L	V
Template Known Secondary structure			T	T	S	T	T								T	T							T	T	T	T		S																	T	T		T	T		S
Template Predicted Secondary structure
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	N	T	E	G	C	S	S	A	V	R	N	G	L	L	L	L	N	L	L	L	C	N	H	H	T	L	G	D	Q	I	I	T	Q	E	L	R	D	T	L	F	R	H	S	G	I	A	P	G	T	E	P	M	P	T	T	R	T	I
Query Conservation
Alig confidence																																													.	.	.	.
Template Conservation																																													.	.	.	.
Template Sequence		Q	L	L	G	S	D	D	I	N	V	V	T	C	A	A	G	I	L	S	N	L	T	C	N	N	Y	K	N	K	M	M	V	C	Q	V	G	G	I	E	A	L	V	R	.	.	.	.	T	V	L	R	A	G	D	R	E	D	I	T	E
Template Known Secondary structure				T	T		S																T	S	S											T	T								.	.	.	.						T	T
Template Predicted Secondary structure																																													.	.	.	.
Template SS confidence
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.					450	.	.	.	.	.	.	.	.	.	460	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	M	L	L	S	R	Y	S	E	P	R	G	S	P	E	R	A	V	L	E	T	P	S	T	Q	G	Q	D	G	S	P	E	S	L	I	R	S	L	V	G	D	L	S	A	E	L	F	L	D	L	E	R	V	L	C	H	E	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	I	C	A	L	R	H	L	T	S	R	H	Q	E	A	E	M	A	Q	N	A	V	R	L	H	Y	G	L	P	V	V	V	K	L	L	H	P	P	S	H	W	P	L	I	K	A	T	V	G	L	I	R	N	L	A	L	C	P	A
Template Known Secondary structure											T	S	S	S	T	T											T	T								T	T	S	T	T																	T	T	S	G	G
Template Predicted Secondary structure
Template SS confidence
		463	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.
		314	.	.	.	.	.	320							.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.
Query Sequence		P	P	A	A	V	R	P	.	.	.	.	.	.	L	L	R	R	L	Q	Q	E	T	Q	P	F	L	L	L	L	R	T	L	D	A	P	G	P	N	R	T	L	L	L	T	I	L	R	V	M	T	R	L	L	D	H	P	E	T	M	V
Query Conservation									.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.												.	.
Template Conservation																										.	.
Template Sequence		N	H	A	P	L	R	E	Q	G	A	I	P	R	L	V	Q	L	L	V	R	A	H	Q	D	.	.	T	Q	R	R	Q	F	V	E	G	V	R	M	E	E	I	V	E	G	C	T	G	A	L	H	I	L	A	R	D	V	H	N	R	I
Template Known Secondary structure		G							T	T																.	.			T				B	T	T	B																	T	T	S
Template Predicted Secondary structure																										.	.
Template SS confidence
		523	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.			.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	W	H	E	V	L	E	P	C	L	N	C	L	N	G	P	S	S	D	S	E	V	V	Q	E	V	T	C	F	L	H	R	L	A	L	M	Q	K	D	Y	A	V	V	L	C	C	L	G	G	K	E	A	L	S	K	V	L	D
Query Conservation
Alig confidence																	.																				.
Template Conservation																	.																				.
Template Sequence		V	I	R	G	L	N	T	I	P	L	F	V	Q	L	L	.	Y	S	P	I	E	N	I	Q	R	V	A	A	G	V	L	C	E	L	A	.	Q	D	K	E	A	A	E	A	I	E	A	E	G	A	T	A	P	L	T	E	L	L	H
Template Known Secondary structure						T	T									T	.	T		S																T	.	T	S										T	T									T	T
Template Predicted Secondary structure																	.																				.
Template SS confidence
		589	590	.	.	.	.	.	.	.	.	.	600	.	.	.		.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.		.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.

No model constructed - rank, confidence too low