Job Description Q80TT8 Confidence 99.84% Date Wed Jul 10 14:12:26 BST 2013 Rank 10 Aligned Residues 234 % Identity 24% Template d1ldja3 SCOP info Cullin homology domain Cullin homology domain Cullin homology domain Resolution 3.00 Model Dimensions (Å) X:61.397 Y:60.573 Z:39.532

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		881	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	H	I	S	E	Q	F	A	R	H	I	D	Q	Q	I	H	G	G	L	L	G	G	A	A	G	V	G	M	L	G	R	L	Q	R	H	L	E	P	I	M	V	L	S	G	L	E	L	A	T	T	F	E	H	F	Y	Q	H	Y	M
Query Conservation
Alig confidence																			.																					.	.	.
Template Conservation																			.																					.	.	.
Template Sequence		S	S	K	S	P	E	L	L	A	R	Y	C	D	S	L	L	K	.	K	S	S	K	N	P	E	E	A	E	L	E	D	T	L	N	Q	V	M	V	.	.	.	V	F	K	Y	I	E	D	K	D	V	F	Q	K	F	Y	A	K	M	L
Template Known Secondary structure		T	T															B	.			S	S																	.	.	.			T	T		S
Template Predicted Secondary structure																			.																					.	.	.
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.		.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.				.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
		941	.	.	.	.	.	.	.	.	950			.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.				970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.
Predicted Secondary structure												.	.																				.	.	.
Query SS confidence												.	.																				.	.	.
Query Sequence		A	D	R	L	L	S	L	G	S	S	.	.	W	L	E	G	A	V	L	E	Q	I	G	P	C	F	P	N	R	L	P	.	.	.	Q	L	M	L	Q	S	L	H	T	S	E	E	L	Q	H	R	F	H	L	F	Q	L	Q	Q	L	D
Query Conservation												.	.																				.	.	.
Alig confidence												.	.																				.	.	.																									.	.
Template Conservation																																																												.	.
Template Sequence		A	K	R	L	V	H	Q	N	S	A	S	D	D	A	E	A	S	M	I	S	K	L	K	Q	A	C	G	F	E	Y	T	S	K	L	Q	R	M	F	Q	D	I	G	V	S	K	D	L	N	E	Q	F	K	K	H	L	T	N	S	.	.
Template Known Secondary structure							T	T		B	S																																														T	T	T	.	.
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.
		996	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	L	L	E	Q	G	D	Q	E	E	W	R	P	E	K	V	E	E	D	D	E	G	Q	E	T	G	R	E	L	F	T	D	P	G	P	A	I	S	V	L	V	L	S	P	R	C	W	P	V	S	P	L	C	Y	L	H	H	P	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	L	D	L	D	F	S	I	Q	V	L	S	S	G	S	W	P	F	Q	Q	S	C	T	F	A	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S									T	T	T	S						S				.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template SS confidence
																																	529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
		1056	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.		.	.	.	.	.	1100	.	.					.	.	.	.	.	.	.	1110
Predicted Secondary structure																																									.									.	.	.	.
Query SS confidence																																									.									.	.	.	.
Query Sequence		K	H	L	Q	A	E	L	C	D	A	L	E	R	F	S	S	F	Y	S	H	S	Q	N	C	P	V	L	D	I	G	P	H	R	R	L	Q	W	T	W	.	L	G	R	A	E	L	Q	L	.	.	.	.	G	D	Q	T	L	H	V	S
Query Conservation																																									.									.	.	.	.
Alig confidence		.	.																						.	.	.	.	.	.	.	.									.									.	.	.	.
Template Conservation		.	.																						.	.	.	.	.	.	.	.
Template Sequence		.	.	L	P	S	E	L	E	R	S	Y	Q	R	F	T	A	F	Y	A	S	R	H	S	.	.	.	.	.	.	.	.	G	R	K	L	T	W	L	Y	Q	L	S	K	G	E	L	V	T	N	C	F	K	N	R	Y	T	L	Q	A	S
Template Known Secondary structure		.	.			G	G	G											T	T	T	T		T	.	.	.	.	.	.	.	.	T							G	G	G								S	S	S	S	S
Template Predicted Secondary structure		.	.																						.	.	.	.	.	.	.	.
Template SS confidence
				555	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.									.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.
		1111	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	T	V	Q	M	W	L	L	F	N	Q	S	E	E	V	S	V	E	T	L	L	R	N	S	D	L	S	P	E	L	L	H	Q	A	L	L	P	L	T	S	D	N	G	P	L	T	L	E	E	T	Q	D	Y	P
Query Conservation
Alig confidence																																										.
Template Conservation																																										.
Template Sequence		T	F	Q	M	A	I	L	L	Q	Y	N	T	E	D	A	Y	T	V	Q	Q	L	T	D	S	T	Q	I	K	M	D	I	L	A	Q	V	L	Q	I	L	L	.	K	S	K	L	L	V	L	E	D	E	N	A	N	V
Template Known Secondary structure										G	G	G	S	S	S											T																.		T	T	T				S		T	T			T
Template Predicted Secondary structure																																										.
Template SS confidence
		605	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.		.	.	.	.	.	650	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D