Job Description Q80TT8 Confidence 92.57% Date Wed Jul 10 14:12:26 BST 2013 Rank 66 Aligned Residues 171 % Identity 18% Template d1ldja2 SCOP info alpha-alpha superhelix Cullin repeat-like Cullin repeat Resolution 3.00

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		639	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	W	P	L	F	R	E	Q	L	C	R	R	T	C	L	F	Y	T	I	R	A	Q	A	W	S	R	D	I	A	E	D	R	Q	R	L	L	Q	L	Y	P	R	L	N	R	V	L	R	H	E	Q	N	F	A	D	R	F	L	P	D	D
Query Conservation
Alig confidence																														.	.	.	.	.
Template Conservation																														.	.	.	.	.
Template Sequence		Y	K	E	S	F	E	S	Q	F	L	A	D	T	E	R	F	Y	T	R	E	S	T	E	F	L	Q	Q	N	.	.	.	.	.	P	V	T	E	Y	M	K	K	A	E	A	R	L	L	E	E	Q	R	R	V	Q	V	Y	L	H	E	S
Template Known Secondary structure						T																							S	.	.	.	.	.		T	T	S	S														T	T	T	T	T	T		S	S
Template Predicted Secondary structure																														.	.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.						.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		699	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	A	Q	A	L	G	K	T	C	W	E	A	L	V	S	P	L	V	Q	N	I	T	S	P	D	A	G	G	V	S	S	L	G	W	L	L	D	Q	Y	L	E	H	R	E	S	T	R	S	R	Q	G	P	A	A	S	F	A	S	Q
Query Conservation
Alig confidence		.																						.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																						.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	T	Q	D	E	L	A	R	K	C	E	Q	V	L	I	E	K	H	L	E	I	F	.	.	.	.	.	.	.	H	T	E	F	Q	N	L	L	D	A	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	D
Template Known Secondary structure		.	S	S												S	S	S	S	S				.	.	.	.	.	.	.										S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure		.																						.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.								.	.	.	.	.	.	310	.	.	.	.	.																	.	.	.
		759	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	R	L	C	H	L	L	V	H	V	E	A	P	P	G	P	S	P	E	P	S	S	Q	P	L	S	K	N	S	K	G	Q	D	G	S	P	T	P	A	P	T	P	V	C	P	S	T	S	L	R	N	L	T	Q	C	W	L	S	V
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	R	M	Y	N	L	V	S	R	I	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	L	G	E	L	K	K	L	L	E	T	H
Template Known Secondary structure												S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330																																				.	.	.	.	.	.	.	.	.	340	.	.	.
		819	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.						.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.
Predicted Secondary structure																		.	.	.	.	.
Query SS confidence																		.	.	.	.	.
Query Sequence		V	Q	G	Q	V	S	R	F	L	A	A	A	W	R	A	S	.	.	.	.	.	D	F	V	P	R	Y	C	S	L	Y	Q	R	L	Q	S	A	G	S	E	L	F	G	P	R	A	A	F	T	L	A	L	R	S	G	F	S	G	A	L
Query Conservation																		.	.	.	.	.
Alig confidence																		.	.	.	.	.
Template Conservation
Template Sequence		I	H	N	Q	G	L	A	A	I	E	K	C	G	E	A	A	L	N	D	P	K	M	Y	V	Q	T	V	L	D	V	H	K	K	Y	N	A	L	V	M	S	A	F	N	N	D	A	G	F	V	A	A	L	D	K	A	C	G	R	F	I
Template Known Secondary structure														T	T	S	G	G	G																						T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D