Return to main results Retrieve Phyre Job Id

Job DescriptionQ80TT8
Confidence92.37%DateWed Jul 10 14:12:26 BST 2013
Rank69Aligned Residues51
% Identity31%Templated1chca_
SCOP infoRING/U-box RING/U-box RING finger domain, C3HC4
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1403......1410.........1420.........1430.........1440.........1450.........1460..
Predicted Secondary structure 





























Query SS confidence 



























































Query Sequence  PTRPDQCPVCVTPLGPHDDSPSLCCLHCCCKSCWNEYLTTRIEQNFVLNCTCPIADCPAQ
Query Conservation 
  
  



   
       

 
 
 


 

 



 




 
 

 



 
 

Alig confidence 













..

























........



..



Template Conservation        
 

    ..        


 

  

        ........ 

 ..

  
Template Sequence  ATVAERCPICLEDP. . SNYSMALPCLHAFCYVCITRWIRQNP. . . . . . . . TCPL. . CKVP
Template Known Secondary structure 






SS

S

..
S
TTTTSTTS
........STTT..T


Template Predicted Secondary structure 











..









........



..



Template SS confidence 



























































   2.......10..... ....20.........30.........40. .... ....
 
   1463..
Predicted Secondary structure 

Query SS confidence 


Query Sequence  PTG
Query Conservation 

 
Alig confidence 


Template Conservation 
  
Template Sequence  VES
Template Known Secondary structure 


Template Predicted Secondary structure 
Template SS confidence 


   50..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D