Job Description Q80TT8 Confidence 100.00% Date Wed Jul 10 14:12:26 BST 2013 Rank 1 Aligned Residues 386 % Identity 28% Template c4kblA_ PDB info PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase arih1; PDBTitle: structure of hhari, a ring-ibr-ring ubiquitin ligase: autoinhibition2 of an ariadne-family e3 and insights into ligation mechanism Resolution 3.30 Å Model Dimensions (Å) X:83.269 Y:87.394 Z:64.604

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		1335	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	M	S	P	Q	E	V	E	G	L	M	E	Q	T	V	R	Q	V	Q	E	T	L	N	L	E	P	D	V	A	Q	H	L	L	A	H	S	H	W	G	T	E	Q	L	L	Q	S	Y	S	D	D	P	E	P	L	L	L	A	A	G	L
Query Conservation
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	T	A	E	Q	I	L	Q	H	M	V	E	C	I	R	E	V	N	E	V	I	Q	N	P	A	T	I	T	R	I	L	L	S	H	F	N	W	D	K	E	K	L	M	E	R	Y	F	D	G	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																			T	T	T	T	T														T	T	T													.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		1395	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.		.	.	.	.	.	1450	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		R	V	P	Q	A	Q	V	V	P	T	R	P	D	Q	C	P	V	C	V	T	P	L	G	P	H	D	D	S	P	S	L	C	C	L	H	C	C	C	K	S	C	W	N	E	Y	L	T	T	R	I	.	E	Q	N	F	V	L	N	C	T
Query Conservation																																																				.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.											.																													.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.											.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	N	M	P	C	Q	I	C	Y	L	N	.	Y	P	N	S	Y	F	T	G	L	E	C	G	H	K	F	C	M	Q	C	W	S	E	Y	L	T	T	K	I	M	E	E	G	M	G	Q	T	I	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.					T	T	T				.			S	T	T			B		T	T	S		B														S	S	S	S	S			S			B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.											.
Template SS confidence
													153	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		1454	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	P	I	A	D	C	P	A	Q	P	T	G	A	F	I	R	N	I	V	S	S	P	E	V	I	S	K	Y	E	K	A	L	L	R	G	Y	V	E	S	C	S	N	L	T	W	C	T	N	P	Q	G	C	D	R	I	L	C	R	Q	G
Query Conservation
Alig confidence																																																									.
Template Conservation																																																									.
Template Sequence		C	P	A	H	G	C	D	I	L	V	D	D	N	T	V	M	R	L	I	T	D	S	K	V	K	L	K	Y	Q	H	L	I	T	N	S	F	V	E	C	N	R	L	L	K	W	C	P	A	P	D	C	H	H	V	V	.	K	V	Q	Y
Template Known Secondary structure			T	T	S	S	S			B												S	T	T																		S	S					S	S	T	T						.			S	S
Template Predicted Secondary structure																																																									.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.		.	.	.	.
		1514	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	S	G	T	T	C	S	K	C	G	W	A	S	C	F	S	C	S	F	P	E	A	H	Y	P	A	S	C	G	H	M	S	Q	W	V	D	D	G	G	Y	Y	D	G	M	S	V	E	A	Q	S	K	H	L	A	K	L	I	S	K
Query Conservation
Alig confidence																							.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	D	A	K	P	V	R	C	K	C	G	R	Q	F	C	F	N	C	G	E	N	.	W	H	D	P	V	K	C	K	W	L	K	K	W	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	K	C	I	A	A	N	T	K
Template Known Secondary structure										S	S	S					T	T	T		S	S	.			T	T	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S
Template Predicted Secondary structure																							.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320	.	.	.	.																.	.	.	.	.	330	.	.	.
		1574	.	.	.	.	.	1580	.	.	.	.	.	.	.	.	.	1590	.	.	.			.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		R	C	P	S	C	Q	A	P	I	E	K	N	E	G	C	L	H	M	T	C	.	.	A	R	C	N	H	G	F	C	W	R	C	L	K	S	W	K	P	S	H	K	D	Y	Y	N	C	S	A	M	V	S	K	A	A	R	Q	E	K	R
Query Conservation																						.	.
Alig confidence																						.	.																														.
Template Conservation																																																					.
Template Sequence		E	C	P	K	C	H	V	T	I	E	K	D	G	G	C	N	H	M	V	C	R	N	Q	N	C	K	A	E	F	C	W	V	C	L	G	P	W	E	P	H	G	S	A	W	Y	N	C	N	R	Y	N	.	R	S	R	A	A	L	Q	R
Template Known Secondary structure				T	T	T								S	S		S							S	S							T	T	T			B	S	S	S	T	T	S	S	S			T	T				.
Template Predicted Secondary structure																																																					.
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.		.	.	.	.	.	.	400	.
		1632	.	.	.	.	.	.	.	1640	.	.	.	.	.	.	.	.	.	1650	.	.	.	.	.	.	.	.	.	1660	.	.	.	.	.	.	.	.	.	1670	.	.	.	.	.	.	.	.	.	1680	.	.	.	.	.	.	.	.	.	1690	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Q	D	Y	N	E	R	C	T	F	H	H	Q	A	R	E	F	A	V	N	L	R	N	Q	A	S	A	I	Q	E	V	P	P	P	K	S	F	T	F	L	Q	D	A	C	R	A	L	E	Q	A	R	K	V	L	A	Y	A	C	V	Y
Query Conservation
Alig confidence																												.	.	.
Template Conservation																												.	.	.
Template Sequence		Y	L	F	Y	C	N	R	Y	M	N	H	M	Q	S	L	R	F	E	H	K	L	Y	A	Q	V	K	.	.	.	Q	K	M	E	W	I	E	V	Q	F	L	K	K	A	V	D	V	L	C	Q	C	R	A	T	L	M	Y	T	Y	V	F
Template Known Secondary structure																					T							.	.	.		T				T	T	T		S
Template Predicted Secondary structure																												.	.	.
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.				440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
		1692	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.	.	.	.	.			.	.	.	1730	.	.	.	.	.	.	.	.	.	1740	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		S	F	Y	S	Q	D	T	E	Y	M	D	V	V	E	Q	Q	T	E	N	L	E	L	H	T	N	A	L	Q	I	L	L	E	E	T	L	.	.	L	R	C	R	D	L	A	S	S	L	R	F	L	R	A	D	C	L	S	T	G	T	E
Query Conservation																																					.	.
Alig confidence																																					.	.
Template Conservation
Template Sequence		A	F	Y	L	K	K	N	N	Q	S	I	I	F	E	N	N	Q	A	D	L	E	N	A	T	E	V	L	S	G	Y	L	E	R	D	I	S	Q	D	S	L	Q	D	I	K	Q	K	V	Q	D	K	Y	R	Y	C	E	S	R	R	R	V
Template Known Secondary structure				T																														T	T	T	T	T	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
		1750	.	.	.	.	.	.	.	.	.	1760	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	R	R	I	Q	E	R	L	L	A	I	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	Q	H	V	H	E	G	Y	E	K	D	L	W
Template Known Secondary structure													T
Template Predicted Secondary structure
Template SS confidence
		539	540	.	.	.	.	.	.	.	.	.	550	.	.