 |
| Job Description | Q80TT8 | | Confidence | 62.62% | Date | Wed Jul 10 14:12:26 BST 2013 |
| Rank | 131 | Aligned Residues | 62 |
| % Identity | 16% | Template | c4gy5A_ |
| PDB info |
PDB header:ligase | Chain: A: PDB Molecule:e3 ubiquitin-protein ligase uhrf1; |
PDBTitle: crystal structure of the tandem tudor domain and plant homeodomain of2 uhrf1 with histone h3k9me3
|
| Resolution | 2.96 Å |
|
 |
|   |   |
1552 | . | . | . | . | . | . | . | 1560 | . | . | . | . | . | . | . | . | . | 1570 | . | . | . | . | . | . | . | . | . | 1580 | . | . | . | . | . | . | . | . | . | 1590 | . | . | . | . | . | . | . | . | . | 1600 | . | . | . | . | . | . | . | |
|
. | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
| . | . |
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
| Query Sequence |   |
G | G | Y | Y | D | G | M | S | V | E | A | Q | S | K | H | L | A | K | L | I | S | K | R | C | P | S | C | Q | A | P | I | E | K | N | E | G | C | L | H | M | T | C | A | R | C | N | H | G | F | C | W | R | C | L | K | S | . |
. |
W | K |
| Query Conservation |   |
|
|
|
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
| Template Conservation |   |
  |   |   |
|   |   |
|   |
|   |   |   | . | . | . | . | . | . |   |   |
|   |   |
| . |   |
|   |
|
|
|   |   |   |
|   |   |   |
|
|   |
|
|   |
|   |   |
|
|
|   |   |
|
|   |
|   |   |   |   |
| Template Sequence |   |
G | P | S | C | K | H | C | K | D | D | V | N | . |
. |
. |
. |
. |
. |
R | L | C | R | V | C | . |
A | C | H | L | C | G | G | R | Q | D | P | D | K | Q | L | M | C | D | E | C | D | M | A | F | H | I | Y | C | L | D | P | P | L | S | S |
| Template Known Secondary structure |   |
S |
|
|
| T | T | T | T | T |
| T | T | . | . | . | . | . | . | S |
|
| S | S | S | . | S | B | S | S | S |
|
|
| S | S | G | G | G |  |  |  |
| T | T | T |
|
|  |  |  | T | T |
| S | S | S |
|
|
| S |
| Template Predicted Secondary structure |   |
|
|
|
|  |  |  |
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |
|  |  |  |
|
|
|  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
299 | 300 | . | . | . | . | . | . | . | . | . | 310 | |
|
|
|
|
|
. | . | . | . | . | . | |
. | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . |
|   |
|   |   |
1610 | . | . | . | . | . | . | . | . | . | 1620 |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
P | S | H | K | D | Y | Y | N | C | S | A |
| Query Conservation |   |
|   |
|
|
|
|
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|   |   |   |   |
|   |
|
|   |
| Template Sequence |   |
V | P | S | E | D | E | W | Y | C | P | E |
| Template Known Secondary structure |   |
|
|
| S | S |
|
|
|
| G | G |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |
352 | . | . | . | . | . | . | . | 360 | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|