Job Description Q80TT8 Confidence 56.54% Date Wed Jul 10 14:12:26 BST 2013 Rank 141 Aligned Residues 61 % Identity 23% Template c4gmnA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: structural basis of rpl5 recognition by syo1 Resolution 2.95 Å Model Dimensions (Å) X:27.261 Y:29.521 Z:24.166

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		Q	I	S	S	L	D	T	N	L	Q	L	S	G	L	C	A	L	S	Q	A	V	E	E	V	T	E	R	D	H	P	L	V	R	P	D	R	P	L	R	E	K	L	V	K	.	T	L	V	D	L	L	T	N	Q	V	G	E	K	M	V
Query Conservation																																														.
Alig confidence																								.	.									.	.	.	.	.								.										.	.
Template Conservation																								.	.									.	.	.	.	.																		.	.
Template Sequence		D	L	K	S	P	D	A	K	S	R	T	T	A	A	G	A	I	A	N	I	V	Q	.	.	D	A	K	C	R	K	L	L	.	.	.	.	.	L	R	E	Q	V	V	H	I	V	L	T	E	T	L	T	D	N	.	.	N	I	D	S
Template Known Secondary structure				T		S																T	T	.	.	S	S	S						.	.	.	.	.			T	T								T	G	G	G		S	.	.	S
Template Predicted Secondary structure																								.	.									.	.	.	.	.																		.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.						.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.
		85	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	M	A	L	R	L	L	Y	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	A	G	W	E	I	L	K	V	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D