Job Description Q80TT8 Confidence 39.09% Date Wed Jul 10 14:12:26 BST 2013 Rank 170 Aligned Residues 162 % Identity 23% Template c4apfB_ PDB info PDB header:cell cycle Chain: B: PDB Molecule:cullin 3; PDBTitle: crystal structure of the human klhl11-cul3 complex at 3.1a2 resolution Resolution 3.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		641	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	F	R	E	Q	L	C	R	R	T	C	L	F	Y	T	I	R	A	Q	A	W	S	R	D	I	A	E	D	R	Q	R	L	L	Q	L	Y	P	R	L	N	R	V	L	R	H	E	Q	N	F	A	D	R	F	L	P	D	D	E	A
Query Conservation
Alig confidence																								.	.	.	.	.																																.
Template Conservation																								.	.	.	.	.																																.
Template Sequence		E	D	F	E	A	P	F	L	E	M	S	A	E	F	F	Q	M	E	S	Q	K	F	.	.	.	.	.	L	A	E	N	S	A	S	V	Y	I	K	K	V	E	A	R	I	N	E	E	I	E	R	V	M	H	C	L	D	K	S	.	T
Template Known Secondary structure				T																				.	.	.	.	.				S																								S		G	G	.	G
Template Predicted Secondary structure																								.	.	.	.	.																																.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.						.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.
		701	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	A	L	G	K	T	C	W	E	A	L	V	S	P	L	V	Q	N	I	T	S	P	D	A	G	G	V	S	S	L	G	W	L	L	D	Q	Y	L	E	H	R	E	S	T	R	S	R	Q	G	P	A	A	S	F	A	S	Q	V	R
Query Conservation
Alig confidence																														.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	E	P	I	V	K	V	V	E	R	E	L	I	S	K	H	M	K	T	I	V	E	M	E	N	S	G	L	.	.	V	H	M	L	K	N	G	K	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	G
Template Known Secondary structure														T	G	G	G						T		T	T	S			.	.						T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290	.	.	.	.																		.	.	.
		761	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	C	H	L	L	V	H	V	E	A	P	P	G	P	S	P	E	P	S	S	Q	P	L	S	K	N	S	K	G	Q	D	G	S	P	T	P	A	P	T	P	V	C	P	S	T	S	L	R	N	L	T	Q	C	W	L	S	V	V	Q
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	M	Y	K	L	F	S	R	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	L	K	T	M	C	E	C	M	S	S	Y	L	R
Template Known Secondary structure								T	T	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		298	.	300	.	.	.	.	.	.	.																																				.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		821	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	V	S	R	F	L	A	A	A	W	R	A	S	D	F	V	P	R	Y	C	S	L	Y	Q	R	L	Q	S	A	G	S	E	L	F	G	P	R	A	A	F	T	L	A	L	R	S	G	F	S	G	A	L
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	Q	G	.	.	.	.	.	.	.	.	.	.	.	K	A	L	Q	G	L	D	D	L	K	S	R	F	D	R	F	L	L	E	S	F	N	N	D	R	L	F	K	Q	T	I	A	G	D	F	E	Y	F	L
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	T	T			T															T	S	T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		323	.	.												.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D