Return to main results Retrieve Phyre Job Id

Job DescriptionQ80TT8
Confidence74.71%DateWed Jul 10 14:12:26 BST 2013
Rank117Aligned Residues35
% Identity26%Templatec4ap4A_
PDB info PDB header:ligase/signalling proteinChain: A: PDB Molecule:e3 ubiquitin ligase rnf4; PDBTitle: rnf4 - ubch5a - ubiquitin heterotrimeric complex
Resolution2.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14091410.........1420. ........1430.........1440...
Predicted Secondary structure 










....
Query SS confidence 












. . . .





















Query Sequence  CPVCVTPLGPHDD. . . . SPSLCCLHCCCKSCWNEYLTTR
Query Conservation 



   
     ....  

 
 
 


 

 



 
Alig confidence 












....





















Template Conservation 
 



           
  
 
 
 

  

  
    
Template Sequence  CPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA
Template Known Secondary structure 
TTT

BTT

TT

TT
Template Predicted Secondary structure 














Template SS confidence 






































   136...140.........150.........160.........170....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D