Job Description Q80TT8 Confidence 23.52% Date Wed Jul 10 14:12:26 BST 2013 Rank 261 Aligned Residues 63 % Identity 21% Template c4a18U_ PDB info PDB header:ribosome Chain: U: PDB Molecule:rpl13; PDBTitle: t.thermophila 60s ribosomal subunit in complex with initiation2 factor 6. this file contains 26s rrna and proteins of molecule 1 Resolution 3.52 Å

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		1278	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	R	D	D	R	P	Q	V	L	M	Y	A	T	P	E	P	M	G	P	C	R	G	Q	A	D	V	P	F	C	G	N	K	N	T	E	T	S	R	P	S	P	E	A	V	V	A	L	A	S	L	Q	L	P	A	G	R	T	M	S
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	L	H	A	R	R	A	Q	A	A	A	V	F	P	R	P	T	E	K	L	Q	P	V	V	R	K	Q	T	Q	R	Y	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	T	K	L	G	R	G	F	T
Template Known Secondary structure															T	T	S		S	S		B							S	S	T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S					S	S	B
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.																		.	.	.	.	.	70	.	.	.	.
		1338	.	1340	.	.			.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		P	Q	E	V	E	.	.	G	L	M	E	Q	T	V	R	Q	V	Q	E	T	L	N	L	E	P	D
Query Conservation							.	.
Alig confidence							.	.									.	.	.	.
Template Conservation																	.	.	.	.
Template Sequence		L	Q	E	L	K	A	A	G	I	S	A	A	F	A	Q	.	.	.	.	S	I	G	I	K	V	D
Template Known Secondary structure									T								.	.	.	.			T	B		B
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.					90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D