Job Description Q80TT8 Confidence 75.17% Date Wed Jul 10 14:12:26 BST 2013 Rank 116 Aligned Residues 290 % Identity 15% Template c3t7uA_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:adenomatous polyposis coli protein; PDBTitle: a new crytal structure of apc-arm Resolution 2.90 Å

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																																																									.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.
Query Sequence		K	L	V	K	T	L	V	D	L	L	T	N	Q	V	G	E	K	M	V	V	V	M	A	L	R	L	L	Y	L	L	M	T	K	H	E	W	R	P	L	F	A	R	E	G	G	I	Y	A	V	L	I	C	M	Q	E	.	.	.	.	.
Query Conservation																																																									.	.	.	.	.
Alig confidence															.																																										.	.	.	.	.
Template Conservation															.
Template Sequence		A	Y	C	E	T	C	W	E	W	Q	M	P	A	.	P	V	E	H	Q	I	C	P	A	V	C	V	L	M	K	L	S	F	D	E	E	H	R	H	A	M	N	E	L	G	G	L	Q	A	I	A	E	L	L	Q	V	D	C	E	M	Y
Template Known Secondary structure									T	T					.	G	G	G	G	T												T	T	S										T	T																T
Template Predicted Secondary structure															.
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.		.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	T	S	V	L	V	Q	Q	A	G	L	A	A	L	K	M	L	A	I	A	N	S	S	D	V	P	T	F	I	P	S	R	D	S	I	Q	P	L	F	D	T	Q	M	T	R	E	I	F	A	S	I	D	S	A	T	R	P	G	S
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	H	Y	S	I	T	L	R	R	Y	A	G	M	A	L	T	N	L	T	F	G	D	V	A	N	K	A	T	L	C	S	M	K	G	C	M	R	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																					T	T																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	L	L	L	S	V	P	A	A	V	V	L	M	L	N	T	E	G	C	S	S	A	V	R	N	G	L	L	L	L	N	L	L	L	C	N	H	H	T	L	G	D	Q	I	I	T	Q	E	L	R	D	T	L	F	R	H	S	G	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	V	A	Q	L	K	S	E	S	E	D	L	Q	Q	V	I	A	S	V	L	R	N	L	S	W	R	A	D	V	N	S	K	K	T	L	R	E	V	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.			G	G	G	S	S																	T	T												T	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	G	T	E	P	M	P	T	T	R	T	I	L	T	M	L	L	S	R	Y	S	E	P	R	G	S	P	E	R	A	V	L	E	T	P	S	T	Q	G	Q	D	G	S	P	E	S	L	I	R	S	L	V	G	D	L	S	A	E	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	V	K	A	L	M	E	C	A	L	E	V	K	K	E	S	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																												567	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	D	L	E	R	V	L	C	H	E	G	S	P	P	A	A	V	R	P	L	L	R	R	L	Q	Q	E	T	Q	P	F	L	L	L	L	R	T	L	D	A	P	G	P	N	R	T	L	L	L	T	I	L	R	V	M	T	R	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	S	V	L	S	A	L	W	N	L	S	A	H	C	T	E	N	K	A	D	I	C	A	V	D	G	A	L	A	F	L	V	G	T	L	T	Y	R	S	L	A	I	I	E	S	G	G	G	I	L	R	N	V	S	S	L	I	A	T
Template Known Secondary structure																										S	T	T								G	G	G																						T	T
Template Predicted Secondary structure
Template SS confidence
		585	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure
Query SS confidence
Query Sequence		D	H	P	E	T	M	V	L	P	W	H	E	V	L	E	P	C	L	N	C	L	N	G	P	S	S	D	S	E	V	V	Q	E	V	T	C	F	L	H	R	L	A	L	M	Q	K	D	Y	A	V	V	L	C	C	L	G	G	K	E	A
Query Conservation
Alig confidence																										.	.
Template Conservation																										.	.
Template Sequence		N	E	D	H	R	Q	I	L	R	E	N	N	C	L	Q	T	L	L	Q	H	L	K	S	H	.	.	S	L	T	I	V	S	N	A	C	G	T	L	W	N	L	S	A	R	N	P	K	D	Q	E	A	L	W	D	M	G	A	V	S	M
Template Known Secondary structure												T	T									T	T		S	.	.																T	S	S												T
Template Predicted Secondary structure																										.	.
Template SS confidence
		649	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.			.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.
		421	.	.	.	.			.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		L	S	K	V	L	.	.	D	K	H	S	T	Q	L	L	L	A	S	E	L	R	H	L	V	A	E
Query Conservation							.	.
Alig confidence							.	.
Template Conservation
Template Sequence		L	K	N	L	I	H	S	K	H	K	M	I	A	M	G	S	A	A	A	L	R	N	L	M	A	N
Template Known Secondary structure				T	T	T	T		S	S																T	S
Template Predicted Secondary structure
Template SS confidence
		707	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D